Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.19□□□□□ -1.42
SLC6A4P31645 AP001357.1-201ENST00000586304 1053 ntBASIC6.19□□□□□ -1.42
SLC6A4P31645 AC009948.4-201ENST00000604692 675 ntBASIC6.19□□□□□ -1.42
SLC6A4P31645 AC018690.1-201ENST00000608144 626 ntBASIC6.19□□□□□ -1.42
SLC6A4P31645 AP000894.4-201ENST00000610185 483 ntBASIC6.19□□□□□ -1.42
SLC6A4P31645 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
SLC6A4P31645 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC6.19□□□□□ -1.42
SLC6A4P31645 AC006963.1-201ENST00000624003 1052 ntBASIC6.19□□□□□ -1.42
SLC6A4P31645 AC004777.1-201ENST00000624317 287 ntBASIC6.19□□□□□ -1.42
SLC6A4P31645 AC103703.1-201ENST00000634783 663 ntBASIC6.19□□□□□ -1.42
SLC6A4P31645 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SLC6A4P31645 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
SLC6A4P31645 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
SLC6A4P31645 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SLC6A4P31645 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.19□□□□□ -1.42
SLC6A4P31645 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.19□□□□□ -1.42
SLC6A4P31645 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SLC6A4P31645 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
SLC6A4P31645 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SLC6A4P31645 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SLC6A4P31645 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
SLC6A4P31645 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
SLC6A4P31645 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.18□□□□□ -1.42
SLC6A4P31645 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SLC6A4P31645 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
SLC6A4P31645 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SLC6A4P31645 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.18□□□□□ -1.42
SLC6A4P31645 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SLC6A4P31645 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SLC6A4P31645 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
SLC6A4P31645 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SLC6A4P31645 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SLC6A4P31645 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SLC6A4P31645 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SLC6A4P31645 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SLC6A4P31645 RNU1-150P-201ENST00000362491 162 ntBASIC6.18□□□□□ -1.42
SLC6A4P31645 RNU6-298P-201ENST00000390888 96 ntBASIC6.18□□□□□ -1.42
SLC6A4P31645 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
SLC6A4P31645 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.18□□□□□ -1.42
SLC6A4P31645 SLC20A1P1-201ENST00000413906 956 ntBASIC6.18□□□□□ -1.42
SLC6A4P31645 RPS3P2-201ENST00000421346 701 ntBASIC6.18□□□□□ -1.42
SLC6A4P31645 AC245884.2-201ENST00000426257 404 ntBASIC6.18□□□□□ -1.42
SLC6A4P31645 RPS29P14-201ENST00000431518 171 ntBASIC6.18□□□□□ -1.42
SLC6A4P31645 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.18□□□□□ -1.42
SLC6A4P31645 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC6.18□□□□□ -1.42
SLC6A4P31645 MTCYBP31-201ENST00000438855 1122 ntBASIC6.18□□□□□ -1.42
SLC6A4P31645 BMS1P10-201ENST00000443754 1120 ntBASIC6.18□□□□□ -1.42
SLC6A4P31645 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SLC6A4P31645 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SLC6A4P31645 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.18□□□□□ -1.42
SLC6A4P31645 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.18□□□□□ -1.42
SLC6A4P31645 SDC4P-201ENST00000453285 601 ntBASIC6.18□□□□□ -1.42
SLC6A4P31645 TPT1P1-201ENST00000458495 518 ntBASIC6.18□□□□□ -1.42
SLC6A4P31645 AC084754.1-201ENST00000463466 464 ntBASIC6.18□□□□□ -1.42
SLC6A4P31645 AC023245.1-201ENST00000468501 517 ntBASIC6.18□□□□□ -1.42
SLC6A4P31645 RPL5P12-201ENST00000477071 851 ntBASIC6.18□□□□□ -1.42
SLC6A4P31645 AC020779.1-201ENST00000478757 796 ntBASIC6.18□□□□□ -1.42
SLC6A4P31645 AC083795.1-201ENST00000491760 320 ntBASIC6.18□□□□□ -1.42
SLC6A4P31645 OR5H3P-201ENST00000502817 919 ntBASIC6.18□□□□□ -1.42
SLC6A4P31645 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.18□□□□□ -1.42
SLC6A4P31645 SNORA81.2-201ENST00000516868 170 ntBASIC6.18□□□□□ -1.42
SLC6A4P31645 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC6.18□□□□□ -1.42
SLC6A4P31645 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC6.18□□□□□ -1.42
SLC6A4P31645 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.18□□□□□ -1.42
SLC6A4P31645 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.18□□□□□ -1.42
SLC6A4P31645 AC007494.1-201ENST00000562293 760 ntBASIC6.18□□□□□ -1.42
SLC6A4P31645 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6.18□□□□□ -1.42
SLC6A4P31645 MIR4776-2-201ENST00000580204 80 ntBASIC6.18□□□□□ -1.42
SLC6A4P31645 AP000919.1-202ENST00000581139 1264 ntBASIC6.18□□□□□ -1.42
SLC6A4P31645 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.18□□□□□ -1.42
SLC6A4P31645 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.18□□□□□ -1.42
SLC6A4P31645 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.18□□□□□ -1.42
SLC6A4P31645 MIR6729-201ENST00000618194 65 ntBASIC6.18□□□□□ -1.42
SLC6A4P31645 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC6.18□□□□□ -1.42
SLC6A4P31645 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.18□□□□□ -1.42
SLC6A4P31645 MIR4302-201ENST00000638058 60 ntBASIC6.18□□□□□ -1.42
SLC6A4P31645 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SLC6A4P31645 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SLC6A4P31645 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SLC6A4P31645 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
SLC6A4P31645 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SLC6A4P31645 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SLC6A4P31645 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
SLC6A4P31645 SAMM50P1-201ENST00000455403 1399 ntBASIC6.18□□□□□ -1.42
SLC6A4P31645 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SLC6A4P31645 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.17□□□□□ -1.42
SLC6A4P31645 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SLC6A4P31645 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
SLC6A4P31645 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SLC6A4P31645 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SLC6A4P31645 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.17□□□□□ -1.42
SLC6A4P31645 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.17□□□□□ -1.42
SLC6A4P31645 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
SLC6A4P31645 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SLC6A4P31645 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SLC6A4P31645 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.17□□□□□ -1.42
SLC6A4P31645 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SLC6A4P31645 SELENOWP1-201ENST00000322792 252 ntBASIC6.17□□□□□ -1.42
SLC6A4P31645 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.17□□□□□ -1.42
SLC6A4P31645 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms