Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHC1P29353 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SHC1P29353 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.09□□□□□ -1.59
SHC1P29353 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHC1P29353 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.09□□□□□ -1.59
SHC1P29353 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHC1P29353 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHC1P29353 AC114786.1-201ENST00000512892 1415 ntBASIC5.09□□□□□ -1.59
SHC1P29353 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHC1P29353 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SHC1P29353 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.09□□□□□ -1.59
SHC1P29353 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.09□□□□□ -1.59
SHC1P29353 RNA5SP131-201ENST00000365452 119 ntBASIC5.09□□□□□ -1.59
SHC1P29353 RNA5SP187-201ENST00000384400 119 ntBASIC5.09□□□□□ -1.59
SHC1P29353 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SHC1P29353 GPS2P1-201ENST00000411761 986 ntBASIC5.09□□□□□ -1.59
SHC1P29353 AL596448.1-201ENST00000415024 392 ntBASIC5.09□□□□□ -1.59
SHC1P29353 OR10T1P-201ENST00000424327 947 ntBASIC5.09□□□□□ -1.59
SHC1P29353 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.09□□□□□ -1.59
SHC1P29353 AC006335.2-201ENST00000437993 330 ntBASIC5.09□□□□□ -1.59
SHC1P29353 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.09□□□□□ -1.59
SHC1P29353 AC005297.1-201ENST00000444765 862 ntBASIC5.09□□□□□ -1.59
SHC1P29353 LRRC37A14P-201ENST00000452297 462 ntBASIC5.09□□□□□ -1.59
SHC1P29353 MEMO1P4-201ENST00000453590 386 ntBASIC5.09□□□□□ -1.59
SHC1P29353 AP000547.1-201ENST00000454360 617 ntBASIC5.09□□□□□ -1.59
SHC1P29353 AC087672.1-201ENST00000479876 766 ntBASIC5.09□□□□□ -1.59
SHC1P29353 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHC1P29353 AC109481.1-201ENST00000509173 282 ntBASIC5.09□□□□□ -1.59
SHC1P29353 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.09□□□□□ -1.59
SHC1P29353 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
SHC1P29353 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.09□□□□□ -1.59
SHC1P29353 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.09□□□□□ -1.59
SHC1P29353 AC090286.3-201ENST00000573133 187 ntBASIC5.09□□□□□ -1.59
SHC1P29353 AC020978.7-201ENST00000575953 1187 ntBASIC5.09□□□□□ -1.59
SHC1P29353 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SHC1P29353 AL021368.1-201ENST00000607490 540 ntBASIC5.09□□□□□ -1.59
SHC1P29353 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.09□□□□□ -1.59
SHC1P29353 RNA5SP440-201ENST00000612665 119 ntBASIC5.09□□□□□ -1.59
SHC1P29353 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.09□□□□□ -1.59
SHC1P29353 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.09□□□□□ -1.59
SHC1P29353 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.09□□□□□ -1.59
SHC1P29353 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.09□□□□□ -1.59
SHC1P29353 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.09□□□□□ -1.59
SHC1P29353 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
SHC1P29353 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.09□□□□□ -1.6
SHC1P29353 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.09□□□□□ -1.6
SHC1P29353 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.6
SHC1P29353 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SHC1P29353 YES1P1-201ENST00000418510 1628 ntBASIC5.08□□□□□ -1.6
SHC1P29353 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
SHC1P29353 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SHC1P29353 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.08□□□□□ -1.6
SHC1P29353 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.08□□□□□ -1.6
SHC1P29353 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.08□□□□□ -1.6
SHC1P29353 GVINP1-202ENST00000531871 7271 ntBASIC5.08□□□□□ -1.6
SHC1P29353 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHC1P29353 GAPDHP24-201ENST00000328713 983 ntBASIC5.08□□□□□ -1.6
SHC1P29353 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.08□□□□□ -1.6
SHC1P29353 RNA5SP46-201ENST00000362370 120 ntBASIC5.08□□□□□ -1.6
SHC1P29353 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHC1P29353 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.08□□□□□ -1.6
SHC1P29353 RPL34P3-201ENST00000421454 338 ntBASIC5.08□□□□□ -1.6
SHC1P29353 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.08□□□□□ -1.6
SHC1P29353 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.08□□□□□ -1.6
SHC1P29353 FMO7P-201ENST00000436045 768 ntBASIC5.08□□□□□ -1.6
SHC1P29353 Z84478.1-201ENST00000438230 1219 ntBASIC5.08□□□□□ -1.6
SHC1P29353 AC002504.1-201ENST00000438281 691 ntBASIC5.08□□□□□ -1.6
SHC1P29353 AL359265.1-201ENST00000440296 795 ntBASIC5.08□□□□□ -1.6
SHC1P29353 AC090589.1-201ENST00000473109 362 ntBASIC5.08□□□□□ -1.6
SHC1P29353 RN7SL273P-201ENST00000481561 299 ntBASIC5.08□□□□□ -1.6
SHC1P29353 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SHC1P29353 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.08□□□□□ -1.6
SHC1P29353 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.08□□□□□ -1.6
SHC1P29353 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.08□□□□□ -1.6
SHC1P29353 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.08□□□□□ -1.6
SHC1P29353 IGKV3D-34-201ENST00000522638 302 ntBASIC5.08□□□□□ -1.6
SHC1P29353 AC137627.1-201ENST00000545761 289 ntBASIC5.08□□□□□ -1.6
SHC1P29353 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.08□□□□□ -1.6
SHC1P29353 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.08□□□□□ -1.6
SHC1P29353 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.08□□□□□ -1.6
SHC1P29353 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC5.08□□□□□ -1.6
SHC1P29353 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.08□□□□□ -1.6
SHC1P29353 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.08□□□□□ -1.6
SHC1P29353 AL161912.3-201ENST00000605404 628 ntBASIC5.08□□□□□ -1.6
SHC1P29353 AC126175.1-201ENST00000617041 758 ntBASIC5.08□□□□□ -1.6
SHC1P29353 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHC1P29353 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.08□□□□□ -1.6
SHC1P29353 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SHC1P29353 KARSP1-201ENST00000451871 1752 ntBASIC5.08□□□□□ -1.6
SHC1P29353 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHC1P29353 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHC1P29353 AC002525.1-201ENST00000624392 1622 ntBASIC5.08□□□□□ -1.6
SHC1P29353 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.08□□□□□ -1.6
SHC1P29353 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHC1P29353 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHC1P29353 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHC1P29353 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
SHC1P29353 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHC1P29353 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
SHC1P29353 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms