Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
RXRBP28702 SNORA27.3-201ENST00000364937 134 ntBASIC8.02□□□□□ -1.13
RXRBP28702 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC8.02□□□□□ -1.13
RXRBP28702 AC068138.1-201ENST00000412635 217 ntBASIC8.02□□□□□ -1.13
RXRBP28702 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC8.02□□□□□ -1.13
RXRBP28702 EEF1A1P29-201ENST00000416082 1096 ntBASIC8.02□□□□□ -1.13
RXRBP28702 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC8.02□□□□□ -1.13
RXRBP28702 MTND4LP13-201ENST00000425022 298 ntBASIC8.02□□□□□ -1.13
RXRBP28702 AC017019.1-201ENST00000426129 261 ntBASIC8.02□□□□□ -1.13
RXRBP28702 CYP4F32P-201ENST00000426492 504 ntBASIC8.02□□□□□ -1.13
RXRBP28702 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC8.02□□□□□ -1.13
RXRBP28702 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC8.02□□□□□ -1.13
RXRBP28702 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC8.02□□□□□ -1.13
RXRBP28702 RPS29P33-201ENST00000456717 146 ntBASIC8.02□□□□□ -1.13
RXRBP28702 MTCYBP14-201ENST00000457471 715 ntBASIC8.02□□□□□ -1.13
RXRBP28702 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC8.02□□□□□ -1.13
RXRBP28702 RN7SL738P-201ENST00000470264 297 ntBASIC8.02□□□□□ -1.13
RXRBP28702 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC8.02□□□□□ -1.13
RXRBP28702 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC8.02□□□□□ -1.13
RXRBP28702 SNORA76.2-201ENST00000517095 137 ntBASIC8.02□□□□□ -1.13
RXRBP28702 IGKV1D-22-201ENST00000518953 324 ntBASIC8.02□□□□□ -1.13
RXRBP28702 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RXRBP28702 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC8.02□□□□□ -1.13
RXRBP28702 AC022832.1-201ENST00000530718 645 ntBASIC8.02□□□□□ -1.13
RXRBP28702 HMGB1P42-201ENST00000532126 553 ntBASIC8.02□□□□□ -1.13
RXRBP28702 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC8.02□□□□□ -1.13
RXRBP28702 AL391156.1-201ENST00000554965 554 ntBASIC8.02□□□□□ -1.13
RXRBP28702 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC8.02□□□□□ -1.13
RXRBP28702 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC8.02□□□□□ -1.13
RXRBP28702 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC8.02□□□□□ -1.13
RXRBP28702 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
RXRBP28702 AL021918.2-201ENST00000613415 194 ntBASIC8.02□□□□□ -1.13
RXRBP28702 AC123767.1-202ENST00000620407 817 ntBASIC8.02□□□□□ -1.13
RXRBP28702 AP002782.1-201ENST00000623107 614 ntBASIC8.02□□□□□ -1.13
RXRBP28702 AC098679.5-201ENST00000624394 571 ntBASIC8.02□□□□□ -1.13
RXRBP28702 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC8.02□□□□□ -1.13
RXRBP28702 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
RXRBP28702 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
RXRBP28702 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC8.02□□□□□ -1.13
RXRBP28702 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
RXRBP28702 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RXRBP28702 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RXRBP28702 ING3-204ENST00000431467 1447 ntTSL 2 BASIC8.02□□□□□ -1.13
RXRBP28702 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC8.02□□□□□ -1.13
RXRBP28702 BX322650.1-201ENST00000332359 2143 ntBASIC8.02□□□□□ -1.13
RXRBP28702 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RXRBP28702 AC097634.1-201ENST00000604491 2467 ntBASIC8.02□□□□□ -1.13
RXRBP28702 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC8.02□□□□□ -1.13
RXRBP28702 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RXRBP28702 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC8.01□□□□□ -1.13
RXRBP28702 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RXRBP28702 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
RXRBP28702 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
RXRBP28702 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC8.01□□□□□ -1.13
RXRBP28702 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
RXRBP28702 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC8.01□□□□□ -1.13
RXRBP28702 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC8.01□□□□□ -1.13
RXRBP28702 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC8.01□□□□□ -1.13
RXRBP28702 RMST-210ENST00000640149 2844 ntTSL 5 BASIC8.01□□□□□ -1.13
RXRBP28702 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RXRBP28702 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC8.01□□□□□ -1.13
RXRBP28702 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC8.01□□□□□ -1.13
RXRBP28702 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
RXRBP28702 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
RXRBP28702 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
RXRBP28702 RNA5SP183-201ENST00000362452 119 ntBASIC8.01□□□□□ -1.13
RXRBP28702 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC8.01□□□□□ -1.13
RXRBP28702 RNU6-906P-201ENST00000384700 70 ntBASIC8.01□□□□□ -1.13
RXRBP28702 AP002784.2-201ENST00000397300 549 ntBASIC8.01□□□□□ -1.13
RXRBP28702 AC013442.1-201ENST00000397347 228 ntBASIC8.01□□□□□ -1.13
RXRBP28702 SNRPEP6-201ENST00000407465 277 ntBASIC8.01□□□□□ -1.13
RXRBP28702 AC096533.1-201ENST00000411645 353 ntBASIC8.01□□□□□ -1.13
RXRBP28702 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC8.01□□□□□ -1.13
RXRBP28702 RPL36P18-201ENST00000419316 318 ntBASIC8.01□□□□□ -1.13
RXRBP28702 COX6CP17-201ENST00000421389 185 ntBASIC8.01□□□□□ -1.13
RXRBP28702 TRGV7-201ENST00000427089 353 ntBASIC8.01□□□□□ -1.13
RXRBP28702 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC8.01□□□□□ -1.13
RXRBP28702 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC8.01□□□□□ -1.13
RXRBP28702 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC8.01□□□□□ -1.13
RXRBP28702 AL136455.1-201ENST00000441083 1240 ntBASIC8.01□□□□□ -1.13
RXRBP28702 AL096829.2-201ENST00000446582 742 ntBASIC8.01□□□□□ -1.13
RXRBP28702 MTND2P19-201ENST00000449129 1012 ntBASIC8.01□□□□□ -1.13
RXRBP28702 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC8.01□□□□□ -1.13
RXRBP28702 OR7E157P-201ENST00000494376 911 ntBASIC8.01□□□□□ -1.13
RXRBP28702 AC108475.1-201ENST00000507880 950 ntBASIC8.01□□□□□ -1.13
RXRBP28702 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
RXRBP28702 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC8.01□□□□□ -1.13
RXRBP28702 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC8.01□□□□□ -1.13
RXRBP28702 MIR4801-201ENST00000582704 82 ntBASIC8.01□□□□□ -1.13
RXRBP28702 AC010327.2-201ENST00000587647 488 ntBASIC8.01□□□□□ -1.13
RXRBP28702 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC8.01□□□□□ -1.13
RXRBP28702 BNIP3P30-201ENST00000601184 574 ntBASIC8.01□□□□□ -1.13
RXRBP28702 AC245297.2-201ENST00000610119 565 ntBASIC8.01□□□□□ -1.13
RXRBP28702 AL157770.1-201ENST00000623049 439 ntBASIC8.01□□□□□ -1.13
RXRBP28702 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RXRBP28702 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC8.01□□□□□ -1.13
RXRBP28702 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RXRBP28702 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RXRBP28702 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RXRBP28702 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms