Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 RPS27AP16-201ENST00000492222 470 ntBASIC6.33□□□□□ -1.4
XPAP23025 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC6.33□□□□□ -1.4
XPAP23025 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
XPAP23025 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.33□□□□□ -1.4
XPAP23025 RNA5SP473-201ENST00000516402 125 ntBASIC6.33□□□□□ -1.4
XPAP23025 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.33□□□□□ -1.4
XPAP23025 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
XPAP23025 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.33□□□□□ -1.4
XPAP23025 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.33□□□□□ -1.4
XPAP23025 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC6.33□□□□□ -1.4
XPAP23025 AC107958.1-201ENST00000556576 290 ntBASIC6.33□□□□□ -1.4
XPAP23025 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.33□□□□□ -1.4
XPAP23025 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC6.33□□□□□ -1.4
XPAP23025 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
XPAP23025 MTND3P13-201ENST00000574391 343 ntBASIC6.33□□□□□ -1.4
XPAP23025 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC6.33□□□□□ -1.4
XPAP23025 RN7SL622P-201ENST00000585292 275 ntBASIC6.33□□□□□ -1.4
XPAP23025 AC067852.5-201ENST00000589299 310 ntBASIC6.33□□□□□ -1.4
XPAP23025 AC146944.4-201ENST00000602697 718 ntBASIC6.33□□□□□ -1.4
XPAP23025 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC6.33□□□□□ -1.4
XPAP23025 AL139344.1-201ENST00000605228 195 ntBASIC6.33□□□□□ -1.4
XPAP23025 AC107952.2-201ENST00000606048 486 ntBASIC6.33□□□□□ -1.4
XPAP23025 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC6.33□□□□□ -1.4
XPAP23025 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC6.33□□□□□ -1.4
XPAP23025 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
XPAP23025 AL158062.1-201ENST00000619632 745 ntBASIC6.33□□□□□ -1.4
XPAP23025 AC004943.3-201ENST00000624116 600 ntBASIC6.33□□□□□ -1.4
XPAP23025 BX649567.1-201ENST00000642071 1134 ntBASIC6.33□□□□□ -1.4
XPAP23025 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
XPAP23025 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
XPAP23025 AC018717.1-201ENST00000457712 1505 ntBASIC6.33□□□□□ -1.4
XPAP23025 PABPC1P8-201ENST00000452851 2086 ntBASIC6.33□□□□□ -1.4
XPAP23025 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.33□□□□□ -1.4
XPAP23025 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
XPAP23025 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.33□□□□□ -1.4
XPAP23025 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
XPAP23025 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
XPAP23025 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.33□□□□□ -1.4
XPAP23025 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC6.33□□□□□ -1.4
XPAP23025 AC099786.3-201ENST00000565735 1410 ntBASIC6.33□□□□□ -1.4
XPAP23025 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
XPAP23025 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
XPAP23025 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.33□□□□□ -1.4
XPAP23025 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
XPAP23025 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
XPAP23025 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
XPAP23025 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
XPAP23025 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
XPAP23025 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
XPAP23025 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
XPAP23025 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
XPAP23025 ZNF658B-201ENST00000602828 3408 ntBASIC6.32□□□□□ -1.4
XPAP23025 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
XPAP23025 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
XPAP23025 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.32□□□□□ -1.4
XPAP23025 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
XPAP23025 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
XPAP23025 FUNDC2P3-201ENST00000334716 533 ntBASIC6.32□□□□□ -1.4
XPAP23025 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
XPAP23025 RNU5B-1-201ENST00000363286 116 ntBASIC6.32□□□□□ -1.4
XPAP23025 RNA5SP346-201ENST00000363541 121 ntBASIC6.32□□□□□ -1.4
XPAP23025 LRRC37BP1-201ENST00000398851 714 ntBASIC6.32□□□□□ -1.4
XPAP23025 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC6.32□□□□□ -1.4
XPAP23025 RNU2-17P-201ENST00000410290 190 ntBASIC6.32□□□□□ -1.4
XPAP23025 RNA5SP198-201ENST00000410376 127 ntBASIC6.32□□□□□ -1.4
XPAP23025 RNA5SP115-201ENST00000411160 107 ntBASIC6.32□□□□□ -1.4
XPAP23025 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC6.32□□□□□ -1.4
XPAP23025 MTND4LP17-201ENST00000414607 293 ntBASIC6.32□□□□□ -1.4
XPAP23025 USP9YP21-201ENST00000420603 432 ntBASIC6.32□□□□□ -1.4
XPAP23025 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.32□□□□□ -1.4
XPAP23025 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC6.32□□□□□ -1.4
XPAP23025 PNRC2P1-201ENST00000423940 420 ntBASIC6.32□□□□□ -1.4
XPAP23025 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
XPAP23025 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.32□□□□□ -1.4
XPAP23025 RPSAP40-201ENST00000442343 891 ntBASIC6.32□□□□□ -1.4
XPAP23025 RPL5P7-201ENST00000444235 813 ntBASIC6.32□□□□□ -1.4
XPAP23025 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
XPAP23025 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.32□□□□□ -1.4
XPAP23025 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC6.32□□□□□ -1.4
XPAP23025 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC6.32□□□□□ -1.4
XPAP23025 MTCO3P28-201ENST00000513351 515 ntBASIC6.32□□□□□ -1.4
XPAP23025 RNA5SP400-201ENST00000517155 111 ntBASIC6.32□□□□□ -1.4
XPAP23025 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.32□□□□□ -1.4
XPAP23025 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.32□□□□□ -1.4
XPAP23025 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.32□□□□□ -1.4
XPAP23025 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC6.32□□□□□ -1.4
XPAP23025 VN1R78P-201ENST00000597393 564 ntBASIC6.32□□□□□ -1.4
XPAP23025 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
XPAP23025 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC6.32□□□□□ -1.4
XPAP23025 AC006924.1-201ENST00000610750 559 ntBASIC6.32□□□□□ -1.4
XPAP23025 PART1_2.1-201ENST00000612397 250 ntBASIC6.32□□□□□ -1.4
XPAP23025 AC091304.6-201ENST00000619761 202 ntBASIC6.32□□□□□ -1.4
XPAP23025 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.32□□□□□ -1.4
XPAP23025 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.32□□□□□ -1.4
XPAP23025 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.32□□□□□ -1.4
XPAP23025 AC003985.2-201ENST00000562268 1669 ntBASIC6.32□□□□□ -1.4
XPAP23025 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
XPAP23025 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
XPAP23025 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
XPAP23025 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms