Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.9□□□□□ -1.63
UBCP0CG48 AC104964.3-201ENST00000606115 2860 ntBASIC4.9□□□□□ -1.63
UBCP0CG48 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.9□□□□□ -1.63
UBCP0CG48 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.9□□□□□ -1.63
UBCP0CG48 PWAR1-201ENST00000624188 2414 ntBASIC4.89□□□□□ -1.63
UBCP0CG48 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.89□□□□□ -1.63
UBCP0CG48 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
UBCP0CG48 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
UBCP0CG48 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
UBCP0CG48 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.89□□□□□ -1.63
UBCP0CG48 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.89□□□□□ -1.63
UBCP0CG48 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
UBCP0CG48 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
UBCP0CG48 COX6B1P3-201ENST00000312310 260 ntBASIC4.89□□□□□ -1.63
UBCP0CG48 AL159987.1-201ENST00000347911 293 ntBASIC4.89□□□□□ -1.63
UBCP0CG48 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
UBCP0CG48 RNU1-146P-201ENST00000364015 165 ntBASIC4.89□□□□□ -1.63
UBCP0CG48 RNA5SP30-201ENST00000365552 115 ntBASIC4.89□□□□□ -1.63
UBCP0CG48 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
UBCP0CG48 AL672167.2-201ENST00000377164 879 ntBASIC4.89□□□□□ -1.63
UBCP0CG48 SNORD56.6-201ENST00000384569 71 ntBASIC4.89□□□□□ -1.63
UBCP0CG48 RPL7P56-201ENST00000429441 717 ntBASIC4.89□□□□□ -1.63
UBCP0CG48 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC4.89□□□□□ -1.63
UBCP0CG48 AL596266.1-201ENST00000448132 400 ntBASIC4.89□□□□□ -1.63
UBCP0CG48 AC044810.1-201ENST00000480271 711 ntBASIC4.89□□□□□ -1.63
UBCP0CG48 OR11I1P-201ENST00000486033 954 ntBASIC4.89□□□□□ -1.63
UBCP0CG48 AC009120.1-201ENST00000493458 473 ntBASIC4.89□□□□□ -1.63
UBCP0CG48 AGGF1P3-201ENST00000493675 1213 ntBASIC4.89□□□□□ -1.63
UBCP0CG48 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.89□□□□□ -1.63
UBCP0CG48 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.89□□□□□ -1.63
UBCP0CG48 SCARNA6.1-201ENST00000516989 238 ntBASIC4.89□□□□□ -1.63
UBCP0CG48 IGLV3-24-201ENST00000517477 197 ntBASIC4.89□□□□□ -1.63
UBCP0CG48 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.89□□□□□ -1.63
UBCP0CG48 AC021678.3-201ENST00000517893 476 ntBASIC4.89□□□□□ -1.63
UBCP0CG48 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.89□□□□□ -1.63
UBCP0CG48 RBM7-208ENST00000545678 867 ntTSL 3 BASIC4.89□□□□□ -1.63
UBCP0CG48 NMNAT1P5-201ENST00000559657 841 ntBASIC4.89□□□□□ -1.63
UBCP0CG48 AC002310.3-201ENST00000569728 723 ntBASIC4.89□□□□□ -1.63
UBCP0CG48 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC4.89□□□□□ -1.63
UBCP0CG48 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.89□□□□□ -1.63
UBCP0CG48 BNIP3P41-202ENST00000616656 861 ntBASIC4.89□□□□□ -1.63
UBCP0CG48 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
UBCP0CG48 AC022919.1-201ENST00000624979 626 ntBASIC4.89□□□□□ -1.63
UBCP0CG48 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC4.89□□□□□ -1.63
UBCP0CG48 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.89□□□□□ -1.63
UBCP0CG48 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
UBCP0CG48 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
UBCP0CG48 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.89□□□□□ -1.63
UBCP0CG48 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
UBCP0CG48 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
UBCP0CG48 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
UBCP0CG48 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
UBCP0CG48 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
UBCP0CG48 AL138820.1-201ENST00000617901 5305 ntBASIC4.88□□□□□ -1.63
UBCP0CG48 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.88□□□□□ -1.63
UBCP0CG48 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
UBCP0CG48 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
UBCP0CG48 AL359715.3-201ENST00000569267 2123 ntBASIC4.88□□□□□ -1.63
UBCP0CG48 AC104966.1-201ENST00000467010 1464 ntBASIC4.88□□□□□ -1.63
UBCP0CG48 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
UBCP0CG48 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
UBCP0CG48 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
UBCP0CG48 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.88□□□□□ -1.63
UBCP0CG48 MT-RNR2-201ENST00000387347 1559 ntBASIC4.88□□□□□ -1.63
UBCP0CG48 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.88□□□□□ -1.63
UBCP0CG48 AC104623.2-202ENST00000623477 4002 ntBASIC4.88□□□□□ -1.63
UBCP0CG48 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
UBCP0CG48 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
UBCP0CG48 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
UBCP0CG48 OR9K1P-201ENST00000326513 941 ntBASIC4.88□□□□□ -1.63
UBCP0CG48 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
UBCP0CG48 NPM1P40-201ENST00000412758 733 ntBASIC4.88□□□□□ -1.63
UBCP0CG48 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.88□□□□□ -1.63
UBCP0CG48 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC4.88□□□□□ -1.63
UBCP0CG48 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.88□□□□□ -1.63
UBCP0CG48 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.88□□□□□ -1.63
UBCP0CG48 AC012512.1-201ENST00000446594 718 ntBASIC4.88□□□□□ -1.63
UBCP0CG48 AC093166.3-201ENST00000448785 303 ntBASIC4.88□□□□□ -1.63
UBCP0CG48 AL358876.1-201ENST00000453364 1075 ntBASIC4.88□□□□□ -1.63
UBCP0CG48 AC005165.2-201ENST00000466070 380 ntBASIC4.88□□□□□ -1.63
UBCP0CG48 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC4.88□□□□□ -1.63
UBCP0CG48 RN7SL612P-201ENST00000497704 295 ntBASIC4.88□□□□□ -1.63
UBCP0CG48 RBBP4P1-201ENST00000502424 1276 ntBASIC4.88□□□□□ -1.63
UBCP0CG48 LSM3P4-201ENST00000502948 309 ntBASIC4.88□□□□□ -1.63
UBCP0CG48 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.88□□□□□ -1.63
UBCP0CG48 DUTP7-201ENST00000507982 486 ntBASIC4.88□□□□□ -1.63
UBCP0CG48 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC4.88□□□□□ -1.63
UBCP0CG48 HSD3BP3-201ENST00000514706 994 ntBASIC4.88□□□□□ -1.63
UBCP0CG48 RNA5SP340-201ENST00000517132 107 ntBASIC4.88□□□□□ -1.63
UBCP0CG48 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.88□□□□□ -1.63
UBCP0CG48 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC4.88□□□□□ -1.63
UBCP0CG48 AC079064.1-201ENST00000528365 362 ntBASIC4.88□□□□□ -1.63
UBCP0CG48 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC4.88□□□□□ -1.63
UBCP0CG48 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
UBCP0CG48 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.88□□□□□ -1.63
UBCP0CG48 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
UBCP0CG48 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC4.88□□□□□ -1.63
UBCP0CG48 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC4.88□□□□□ -1.63
UBCP0CG48 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.88□□□□□ -1.63
UBCP0CG48 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms