Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 AC079610.2-201ENST00000604818 690 ntBASIC7.29□□□□□ -1.24
HMGB1P09429 AC141002.1-201ENST00000607025 279 ntBASIC7.29□□□□□ -1.24
HMGB1P09429 AC015819.1-201ENST00000613588 663 ntBASIC7.29□□□□□ -1.24
HMGB1P09429 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
HMGB1P09429 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC7.29□□□□□ -1.24
HMGB1P09429 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
HMGB1P09429 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC7.29□□□□□ -1.24
HMGB1P09429 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
HMGB1P09429 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
HMGB1P09429 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC7.29□□□□□ -1.24
HMGB1P09429 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC7.29□□□□□ -1.24
HMGB1P09429 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC7.29□□□□□ -1.24
HMGB1P09429 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
HMGB1P09429 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
HMGB1P09429 AC079753.1-201ENST00000623243 3868 ntBASIC7.28□□□□□ -1.24
HMGB1P09429 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
HMGB1P09429 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
HMGB1P09429 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC7.28□□□□□ -1.24
HMGB1P09429 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
HMGB1P09429 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC7.28□□□□□ -1.24
HMGB1P09429 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
HMGB1P09429 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
HMGB1P09429 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
HMGB1P09429 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC7.28□□□□□ -1.24
HMGB1P09429 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
HMGB1P09429 SNORA70.9-201ENST00000384370 135 ntBASIC7.28□□□□□ -1.24
HMGB1P09429 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
HMGB1P09429 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC7.28□□□□□ -1.24
HMGB1P09429 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC7.28□□□□□ -1.24
HMGB1P09429 MTATP6P19-201ENST00000413797 659 ntBASIC7.28□□□□□ -1.24
HMGB1P09429 OR13Z1P-201ENST00000416141 834 ntBASIC7.28□□□□□ -1.24
HMGB1P09429 MARK2P12-201ENST00000420129 585 ntBASIC7.28□□□□□ -1.24
HMGB1P09429 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC7.28□□□□□ -1.24
HMGB1P09429 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC7.28□□□□□ -1.24
HMGB1P09429 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
HMGB1P09429 AC073476.1-201ENST00000452854 407 ntBASIC7.28□□□□□ -1.24
HMGB1P09429 RN7SL552P-201ENST00000462094 276 ntBASIC7.28□□□□□ -1.24
HMGB1P09429 RN7SL352P-201ENST00000466002 277 ntBASIC7.28□□□□□ -1.24
HMGB1P09429 OR7E22P-201ENST00000478335 1035 ntBASIC7.28□□□□□ -1.24
HMGB1P09429 AC008945.1-201ENST00000505144 499 ntBASIC7.28□□□□□ -1.24
HMGB1P09429 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC7.28□□□□□ -1.24
HMGB1P09429 RNA5SP434-201ENST00000516647 121 ntBASIC7.28□□□□□ -1.24
HMGB1P09429 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC7.28□□□□□ -1.24
HMGB1P09429 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC7.28□□□□□ -1.24
HMGB1P09429 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
HMGB1P09429 OLR1-209ENST00000543993 822 ntTSL 2 BASIC7.28□□□□□ -1.24
HMGB1P09429 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.28□□□□□ -1.24
HMGB1P09429 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC7.28□□□□□ -1.24
HMGB1P09429 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
HMGB1P09429 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC7.28□□□□□ -1.24
HMGB1P09429 AC005034.4-201ENST00000603612 899 ntBASIC7.28□□□□□ -1.24
HMGB1P09429 WBP1LP12-201ENST00000604449 331 ntBASIC7.28□□□□□ -1.24
HMGB1P09429 AC004890.3-201ENST00000605566 1095 ntBASIC7.28□□□□□ -1.24
HMGB1P09429 AL023583.1-201ENST00000607518 1143 ntBASIC7.28□□□□□ -1.24
HMGB1P09429 AC037198.3-201ENST00000616754 526 ntBASIC7.28□□□□□ -1.24
HMGB1P09429 AC114876.1-201ENST00000490962 1366 ntBASIC7.28□□□□□ -1.24
HMGB1P09429 PPBPP2-201ENST00000513150 1362 ntBASIC7.28□□□□□ -1.24
HMGB1P09429 ASNSP1-201ENST00000518311 1939 ntBASIC7.28□□□□□ -1.24
HMGB1P09429 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
HMGB1P09429 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
HMGB1P09429 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
HMGB1P09429 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC7.27□□□□□ -1.24
HMGB1P09429 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
HMGB1P09429 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
HMGB1P09429 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
HMGB1P09429 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC7.27□□□□□ -1.25
HMGB1P09429 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
HMGB1P09429 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
HMGB1P09429 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
HMGB1P09429 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.27□□□□□ -1.25
HMGB1P09429 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC7.27□□□□□ -1.25
HMGB1P09429 RNU6-1005P-201ENST00000384519 107 ntBASIC7.27□□□□□ -1.25
HMGB1P09429 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
HMGB1P09429 RPL23AP17-201ENST00000401064 499 ntBASIC7.27□□□□□ -1.25
HMGB1P09429 VTA1P1-201ENST00000414044 866 ntBASIC7.27□□□□□ -1.25
HMGB1P09429 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
HMGB1P09429 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC7.27□□□□□ -1.25
HMGB1P09429 RPL7P29-201ENST00000437151 728 ntBASIC7.27□□□□□ -1.25
HMGB1P09429 AL590004.3-202ENST00000445883 451 ntBASIC7.27□□□□□ -1.25
HMGB1P09429 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC7.27□□□□□ -1.25
HMGB1P09429 RARRES2P3-201ENST00000457739 473 ntBASIC7.27□□□□□ -1.25
HMGB1P09429 AL603882.1-201ENST00000463059 681 ntBASIC7.27□□□□□ -1.25
HMGB1P09429 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC7.27□□□□□ -1.25
HMGB1P09429 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC7.27□□□□□ -1.25
HMGB1P09429 SNX18P25-201ENST00000510539 758 ntBASIC7.27□□□□□ -1.25
HMGB1P09429 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC7.27□□□□□ -1.25
HMGB1P09429 IGLVIV-66-1-201ENST00000521832 460 ntBASIC7.27□□□□□ -1.25
HMGB1P09429 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC7.27□□□□□ -1.25
HMGB1P09429 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC7.27□□□□□ -1.25
HMGB1P09429 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC7.27□□□□□ -1.25
HMGB1P09429 RERGL-202ENST00000536890 367 ntTSL 3 BASIC7.27□□□□□ -1.25
HMGB1P09429 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC7.27□□□□□ -1.25
HMGB1P09429 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC7.27□□□□□ -1.25
HMGB1P09429 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC7.27□□□□□ -1.25
HMGB1P09429 AC090515.3-201ENST00000560431 315 ntBASIC7.27□□□□□ -1.25
HMGB1P09429 RN7SL230P-201ENST00000580835 303 ntBASIC7.27□□□□□ -1.25
HMGB1P09429 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC7.27□□□□□ -1.25
HMGB1P09429 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC7.27□□□□□ -1.25
HMGB1P09429 AC007423.1-201ENST00000605009 627 ntBASIC7.27□□□□□ -1.25
HMGB1P09429 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms