Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 ALB-214ENST00000509063 1911 ntTSL 5 BASIC3.23□□□□□ -1.89
APOBP04114 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC3.23□□□□□ -1.89
APOBP04114 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
APOBP04114 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC3.23□□□□□ -1.89
APOBP04114 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC3.23□□□□□ -1.89
APOBP04114 SDAD1P1-202ENST00000524156 2051 ntBASIC3.23□□□□□ -1.89
APOBP04114 SLC33A1-202ENST00000392845 9217 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
APOBP04114 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC3.23□□□□□ -1.89
APOBP04114 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
APOBP04114 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
APOBP04114 SNORD8-201ENST00000363915 110 ntBASIC3.22□□□□□ -1.89
APOBP04114 SNORD113.2-201ENST00000364166 89 ntBASIC3.22□□□□□ -1.89
APOBP04114 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC3.22□□□□□ -1.89
APOBP04114 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.22□□□□□ -1.89
APOBP04114 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC3.22□□□□□ -1.89
APOBP04114 RNGTTP1-201ENST00000420965 728 ntBASIC3.22□□□□□ -1.89
APOBP04114 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.22□□□□□ -1.89
APOBP04114 AC090058.1-201ENST00000498788 435 ntBASIC3.22□□□□□ -1.89
APOBP04114 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC3.22□□□□□ -1.89
APOBP04114 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC3.22□□□□□ -1.89
APOBP04114 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
APOBP04114 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC3.22□□□□□ -1.89
APOBP04114 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
APOBP04114 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC3.22□□□□□ -1.89
APOBP04114 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
APOBP04114 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
APOBP04114 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
APOBP04114 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC3.22□□□□□ -1.89
APOBP04114 AL359715.3-201ENST00000569267 2123 ntBASIC3.22□□□□□ -1.89
APOBP04114 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
APOBP04114 MYO1E-201ENST00000288235 8673 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
APOBP04114 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
APOBP04114 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC3.22□□□□□ -1.89
APOBP04114 SOX5P1-201ENST00000524155 1127 ntBASIC3.22□□□□□ -1.89
APOBP04114 FLNB-214ENST00000493452 7402 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
APOBP04114 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
APOBP04114 AL122126.1-201ENST00000546905 1318 ntBASIC3.22□□□□□ -1.89
APOBP04114 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
APOBP04114 SIM1-202ENST00000369208 8430 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
APOBP04114 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
APOBP04114 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
APOBP04114 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
APOBP04114 SACS-202ENST00000402364 15134 ntTSL 2 BASIC3.22□□□□□ -1.89
APOBP04114 TET3-202ENST00000409262 11388 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
APOBP04114 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC3.22□□□□□ -1.89
APOBP04114 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
APOBP04114 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
APOBP04114 AP003170.5-201ENST00000397185 335 ntBASIC3.22□□□□□ -1.89
APOBP04114 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.22□□□□□ -1.89
APOBP04114 AC010618.1-201ENST00000469924 477 ntBASIC3.22□□□□□ -1.89
APOBP04114 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC3.22□□□□□ -1.89
APOBP04114 AC024451.1-201ENST00000508013 779 ntBASIC3.22□□□□□ -1.89
APOBP04114 RN7SKP98-201ENST00000517070 156 ntBASIC3.22□□□□□ -1.89
APOBP04114 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC3.22□□□□□ -1.89
APOBP04114 BNIP3P5-201ENST00000562290 498 ntBASIC3.22□□□□□ -1.89
APOBP04114 GMFG-202ENST00000594700 397 ntTSL 2 BASIC3.22□□□□□ -1.89
APOBP04114 AL353729.2-201ENST00000605859 1249 ntBASIC3.22□□□□□ -1.89
APOBP04114 CR381572.2-201ENST00000624852 397 ntBASIC3.22□□□□□ -1.89
APOBP04114 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC3.22□□□□□ -1.89
APOBP04114 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
APOBP04114 ERG-205ENST00000398910 4954 ntTSL 5 BASIC3.22□□□□□ -1.89
APOBP04114 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
APOBP04114 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
APOBP04114 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
APOBP04114 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC3.22□□□□□ -1.89
APOBP04114 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
APOBP04114 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
APOBP04114 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC3.22□□□□□ -1.89
APOBP04114 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
APOBP04114 SNORA71.3-201ENST00000362582 128 ntBASIC3.22□□□□□ -1.89
APOBP04114 RNA5SP387-201ENST00000364226 106 ntBASIC3.22□□□□□ -1.89
APOBP04114 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.22□□□□□ -1.89
APOBP04114 RAD23BP1-201ENST00000421404 1227 ntBASIC3.22□□□□□ -1.89
APOBP04114 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC3.22□□□□□ -1.89
APOBP04114 CCDC58P3-201ENST00000590792 430 ntBASIC3.22□□□□□ -1.89
APOBP04114 AC073091.2-201ENST00000603205 907 ntBASIC3.22□□□□□ -1.89
APOBP04114 AC004232.3-201ENST00000622977 525 ntBASIC3.22□□□□□ -1.89
APOBP04114 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
APOBP04114 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC3.22□□□□□ -1.89
APOBP04114 BAZ2A-214ENST00000551812 8600 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.89
APOBP04114 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC3.21□□□□□ -1.89
APOBP04114 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC3.21□□□□□ -1.89
APOBP04114 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.89
APOBP04114 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
APOBP04114 MTOR-201ENST00000361445 8677 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
APOBP04114 MIR129-1-201ENST00000384972 72 ntBASIC3.21□□□□□ -1.9
APOBP04114 MIR600-201ENST00000385007 98 ntBASIC3.21□□□□□ -1.9
APOBP04114 OR6C69P-201ENST00000394268 893 ntBASIC3.21□□□□□ -1.9
APOBP04114 OR4A43P-201ENST00000532938 908 ntBASIC3.21□□□□□ -1.9
APOBP04114 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.21□□□□□ -1.9
APOBP04114 AC006210.2-201ENST00000367074 1545 ntBASIC3.21□□□□□ -1.9
APOBP04114 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC3.21□□□□□ -1.9
APOBP04114 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.9
APOBP04114 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
APOBP04114 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
APOBP04114 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC3.21□□□□□ -1.9
APOBP04114 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
APOBP04114 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
APOBP04114 CASKP1-201ENST00000412870 582 ntBASIC3.21□□□□□ -1.9
APOBP04114 AC073410.1-201ENST00000435125 589 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms