Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 RPL23AP53-201ENST00000521854 457 ntBASIC4.62□□□□□ -1.67
UPK1BO75841 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC4.62□□□□□ -1.67
UPK1BO75841 AC036111.2-201ENST00000533247 901 ntBASIC4.62□□□□□ -1.67
UPK1BO75841 OR9G2P-201ENST00000533326 880 ntBASIC4.62□□□□□ -1.67
UPK1BO75841 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.62□□□□□ -1.67
UPK1BO75841 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.62□□□□□ -1.67
UPK1BO75841 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC4.62□□□□□ -1.67
UPK1BO75841 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.62□□□□□ -1.67
UPK1BO75841 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC4.62□□□□□ -1.67
UPK1BO75841 CARSP1-201ENST00000603171 889 ntBASIC4.62□□□□□ -1.67
UPK1BO75841 AC009027.1-201ENST00000604510 479 ntBASIC4.62□□□□□ -1.67
UPK1BO75841 AC011626.1-201ENST00000604710 562 ntBASIC4.62□□□□□ -1.67
UPK1BO75841 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.62□□□□□ -1.67
UPK1BO75841 AL512652.1-201ENST00000619006 500 ntBASIC4.62□□□□□ -1.67
UPK1BO75841 LINC01109-201ENST00000603837 3081 ntBASIC4.62□□□□□ -1.67
UPK1BO75841 AL929601.4-201ENST00000613011 1341 ntBASIC4.62□□□□□ -1.67
UPK1BO75841 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
UPK1BO75841 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
UPK1BO75841 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.62□□□□□ -1.67
UPK1BO75841 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
UPK1BO75841 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
UPK1BO75841 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
UPK1BO75841 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
UPK1BO75841 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
UPK1BO75841 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.61□□□□□ -1.67
UPK1BO75841 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.61□□□□□ -1.67
UPK1BO75841 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.61□□□□□ -1.67
UPK1BO75841 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
UPK1BO75841 AL159987.1-201ENST00000347911 293 ntBASIC4.61□□□□□ -1.67
UPK1BO75841 RNA5SP110-201ENST00000362638 115 ntBASIC4.61□□□□□ -1.67
UPK1BO75841 RNA5SP223-201ENST00000365174 120 ntBASIC4.61□□□□□ -1.67
UPK1BO75841 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
UPK1BO75841 AP000580.1-201ENST00000404439 358 ntBASIC4.61□□□□□ -1.67
UPK1BO75841 AL139805.1-201ENST00000407837 289 ntBASIC4.61□□□□□ -1.67
UPK1BO75841 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
UPK1BO75841 RNA5SP146-201ENST00000410743 123 ntBASIC4.61□□□□□ -1.67
UPK1BO75841 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC4.61□□□□□ -1.67
UPK1BO75841 MICG-208ENST00000416822 132 ntBASIC4.61□□□□□ -1.67
UPK1BO75841 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.61□□□□□ -1.67
UPK1BO75841 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.61□□□□□ -1.67
UPK1BO75841 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
UPK1BO75841 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.61□□□□□ -1.67
UPK1BO75841 OR52S1P-201ENST00000427016 937 ntBASIC4.61□□□□□ -1.67
UPK1BO75841 KRT18P53-201ENST00000431919 117 ntBASIC4.61□□□□□ -1.67
UPK1BO75841 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
UPK1BO75841 ARL4AP3-201ENST00000441452 574 ntBASIC4.61□□□□□ -1.67
UPK1BO75841 RPL7AP61-201ENST00000443410 636 ntBASIC4.61□□□□□ -1.67
UPK1BO75841 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.61□□□□□ -1.67
UPK1BO75841 AL645937.3-201ENST00000453647 936 ntBASIC4.61□□□□□ -1.67
UPK1BO75841 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
UPK1BO75841 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC4.61□□□□□ -1.67
UPK1BO75841 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.61□□□□□ -1.67
UPK1BO75841 OR2A3P-201ENST00000493774 953 ntBASIC4.61□□□□□ -1.67
UPK1BO75841 RN7SL445P-201ENST00000495609 293 ntBASIC4.61□□□□□ -1.67
UPK1BO75841 RPEP1-201ENST00000504507 658 ntBASIC4.61□□□□□ -1.67
UPK1BO75841 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC4.61□□□□□ -1.67
UPK1BO75841 AC109464.1-201ENST00000511091 819 ntBASIC4.61□□□□□ -1.67
UPK1BO75841 ENPP7P9-201ENST00000514456 627 ntBASIC4.61□□□□□ -1.67
UPK1BO75841 RNA5SP360-201ENST00000516555 118 ntBASIC4.61□□□□□ -1.67
UPK1BO75841 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC4.61□□□□□ -1.67
UPK1BO75841 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.61□□□□□ -1.67
UPK1BO75841 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC4.61□□□□□ -1.67
UPK1BO75841 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.61□□□□□ -1.67
UPK1BO75841 FCGR1CP-201ENST00000579737 1127 ntBASIC4.61□□□□□ -1.67
UPK1BO75841 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC4.61□□□□□ -1.67
UPK1BO75841 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
UPK1BO75841 OR5G5P-204ENST00000627642 621 ntBASIC4.61□□□□□ -1.67
UPK1BO75841 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC4.61□□□□□ -1.67
UPK1BO75841 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
UPK1BO75841 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.61□□□□□ -1.67
UPK1BO75841 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
UPK1BO75841 AC116158.1-201ENST00000560231 2129 ntBASIC4.61□□□□□ -1.67
UPK1BO75841 AC093225.1-201ENST00000506867 1408 ntBASIC4.61□□□□□ -1.67
UPK1BO75841 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.61□□□□□ -1.67
UPK1BO75841 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
UPK1BO75841 AC006210.2-201ENST00000367074 1545 ntBASIC4.61□□□□□ -1.67
UPK1BO75841 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
UPK1BO75841 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.61□□□□□ -1.67
UPK1BO75841 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.6□□□□□ -1.67
UPK1BO75841 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.6□□□□□ -1.67
UPK1BO75841 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.6□□□□□ -1.67
UPK1BO75841 MAPK10-286ENST00000641208 8747 ntBASIC4.6□□□□□ -1.67
UPK1BO75841 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
UPK1BO75841 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
UPK1BO75841 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.6□□□□□ -1.67
UPK1BO75841 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.6□□□□□ -1.67
UPK1BO75841 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
UPK1BO75841 OR5P3-201ENST00000328375 936 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
UPK1BO75841 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
UPK1BO75841 RNU1-65P-201ENST00000363919 148 ntBASIC4.6□□□□□ -1.67
UPK1BO75841 AC092634.1-201ENST00000366505 199 ntBASIC4.6□□□□□ -1.67
UPK1BO75841 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
UPK1BO75841 MIR589-201ENST00000385238 99 ntBASIC4.6□□□□□ -1.67
UPK1BO75841 U3.32-201ENST00000408116 212 ntBASIC4.6□□□□□ -1.67
UPK1BO75841 AC002524.1-201ENST00000411687 547 ntBASIC4.6□□□□□ -1.67
UPK1BO75841 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.6□□□□□ -1.67
UPK1BO75841 AL672212.1-201ENST00000422246 400 ntBASIC4.6□□□□□ -1.67
UPK1BO75841 AC092066.1-201ENST00000425131 317 ntBASIC4.6□□□□□ -1.67
UPK1BO75841 RPS13P2-201ENST00000437890 455 ntBASIC4.6□□□□□ -1.67
UPK1BO75841 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms