Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
SSSCA1O60232 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SSSCA1O60232 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
SSSCA1O60232 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SSSCA1O60232 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
SSSCA1O60232 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.72
SSSCA1O60232 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.34□□□□□ -1.72
SSSCA1O60232 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.33□□□□□ -1.72
SSSCA1O60232 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC4.33□□□□□ -1.72
SSSCA1O60232 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
SSSCA1O60232 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSSCA1O60232 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.33□□□□□ -1.72
SSSCA1O60232 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
SSSCA1O60232 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SSSCA1O60232 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.33□□□□□ -1.72
SSSCA1O60232 AL731566.1-201ENST00000620490 1937 ntBASIC4.33□□□□□ -1.72
SSSCA1O60232 AL022393.1-201ENST00000625142 1677 ntBASIC4.33□□□□□ -1.72
SSSCA1O60232 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.33□□□□□ -1.72
SSSCA1O60232 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SSSCA1O60232 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSSCA1O60232 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSSCA1O60232 RNA5SP223-201ENST00000365174 120 ntBASIC4.33□□□□□ -1.72
SSSCA1O60232 RNA5SP279-201ENST00000365513 117 ntBASIC4.33□□□□□ -1.72
SSSCA1O60232 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SSSCA1O60232 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
SSSCA1O60232 DBIP1-201ENST00000401435 260 ntBASIC4.33□□□□□ -1.72
SSSCA1O60232 AL078599.1-201ENST00000402075 293 ntBASIC4.33□□□□□ -1.72
SSSCA1O60232 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SSSCA1O60232 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.33□□□□□ -1.72
SSSCA1O60232 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC4.33□□□□□ -1.72
SSSCA1O60232 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.33□□□□□ -1.72
SSSCA1O60232 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.33□□□□□ -1.72
SSSCA1O60232 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.33□□□□□ -1.72
SSSCA1O60232 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SSSCA1O60232 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.33□□□□□ -1.72
SSSCA1O60232 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC4.33□□□□□ -1.72
SSSCA1O60232 CST12P-201ENST00000457644 362 ntBASIC4.33□□□□□ -1.72
SSSCA1O60232 TPT1P1-201ENST00000458495 518 ntBASIC4.33□□□□□ -1.72
SSSCA1O60232 AC023194.2-201ENST00000465398 406 ntBASIC4.33□□□□□ -1.72
SSSCA1O60232 RPL7P41-201ENST00000485823 957 ntBASIC4.33□□□□□ -1.72
SSSCA1O60232 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.33□□□□□ -1.72
SSSCA1O60232 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.33□□□□□ -1.72
SSSCA1O60232 RNA5SP340-201ENST00000517132 107 ntBASIC4.33□□□□□ -1.72
SSSCA1O60232 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC4.33□□□□□ -1.72
SSSCA1O60232 BNIP3P1-201ENST00000547295 580 ntBASIC4.33□□□□□ -1.72
SSSCA1O60232 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC4.33□□□□□ -1.72
SSSCA1O60232 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC4.33□□□□□ -1.72
SSSCA1O60232 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC4.33□□□□□ -1.72
SSSCA1O60232 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.33□□□□□ -1.72
SSSCA1O60232 MIR3936-201ENST00000584304 110 ntBASIC4.33□□□□□ -1.72
SSSCA1O60232 AC090774.2-201ENST00000584708 322 ntBASIC4.33□□□□□ -1.72
SSSCA1O60232 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC4.33□□□□□ -1.72
SSSCA1O60232 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.33□□□□□ -1.72
SSSCA1O60232 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.33□□□□□ -1.72
SSSCA1O60232 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.33□□□□□ -1.72
SSSCA1O60232 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSSCA1O60232 uc_338.31-201ENST00000615595 186 ntBASIC4.33□□□□□ -1.72
SSSCA1O60232 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC4.33□□□□□ -1.72
SSSCA1O60232 AP003400.3-201ENST00000624904 346 ntBASIC4.33□□□□□ -1.72
SSSCA1O60232 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
SSSCA1O60232 5S_rRNA.29-201ENST00000641250 107 ntBASIC4.33□□□□□ -1.72
SSSCA1O60232 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SSSCA1O60232 NEAT1-202ENST00000501122 22743 ntBASIC4.33□□□□□ -1.72
SSSCA1O60232 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SSSCA1O60232 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.33□□□□□ -1.72
SSSCA1O60232 MRE11P1-201ENST00000464884 2127 ntBASIC4.33□□□□□ -1.72
SSSCA1O60232 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.33□□□□□ -1.72
SSSCA1O60232 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.32□□□□□ -1.72
SSSCA1O60232 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SSSCA1O60232 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
SSSCA1O60232 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.32□□□□□ -1.72
SSSCA1O60232 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
SSSCA1O60232 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SSSCA1O60232 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.32□□□□□ -1.72
SSSCA1O60232 TCP1P3-201ENST00000414406 1498 ntBASIC4.32□□□□□ -1.72
SSSCA1O60232 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SSSCA1O60232 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SSSCA1O60232 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SSSCA1O60232 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SSSCA1O60232 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SSSCA1O60232 PCAT14-202ENST00000627127 3935 ntBASIC4.32□□□□□ -1.72
SSSCA1O60232 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
SSSCA1O60232 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SSSCA1O60232 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.32□□□□□ -1.72
SSSCA1O60232 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SSSCA1O60232 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC4.32□□□□□ -1.72
SSSCA1O60232 MIR551A-201ENST00000385042 96 ntBASIC4.32□□□□□ -1.72
SSSCA1O60232 RBBP4P5-201ENST00000398583 1266 ntBASIC4.32□□□□□ -1.72
SSSCA1O60232 RN7SKP16-201ENST00000410180 299 ntBASIC4.32□□□□□ -1.72
SSSCA1O60232 MARK2P12-201ENST00000420129 585 ntBASIC4.32□□□□□ -1.72
SSSCA1O60232 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.32□□□□□ -1.72
SSSCA1O60232 AL139158.1-201ENST00000424719 340 ntBASIC4.32□□□□□ -1.72
SSSCA1O60232 NANOGP4-201ENST00000427230 913 ntBASIC4.32□□□□□ -1.72
SSSCA1O60232 BX119321.1-201ENST00000428912 797 ntBASIC4.32□□□□□ -1.72
SSSCA1O60232 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.32□□□□□ -1.72
SSSCA1O60232 HMGB3P24-201ENST00000433260 622 ntBASIC4.32□□□□□ -1.72
SSSCA1O60232 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.32□□□□□ -1.72
SSSCA1O60232 ATP6V1E1P1-201ENST00000439215 681 ntBASIC4.32□□□□□ -1.72
SSSCA1O60232 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.32□□□□□ -1.72
SSSCA1O60232 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms