Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 RPL17P2-201ENST00000491913 451 ntBASIC6.77□□□□□ -1.33
RGPD3A6NKT7 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC6.77□□□□□ -1.33
RGPD3A6NKT7 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC6.77□□□□□ -1.33
RGPD3A6NKT7 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RGPD3A6NKT7 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RGPD3A6NKT7 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RGPD3A6NKT7 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
RGPD3A6NKT7 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
RGPD3A6NKT7 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RGPD3A6NKT7 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.76□□□□□ -1.33
RGPD3A6NKT7 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RGPD3A6NKT7 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC6.76□□□□□ -1.33
RGPD3A6NKT7 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
RGPD3A6NKT7 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.76□□□□□ -1.33
RGPD3A6NKT7 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.76□□□□□ -1.33
RGPD3A6NKT7 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RGPD3A6NKT7 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RGPD3A6NKT7 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
RGPD3A6NKT7 AC013268.3-201ENST00000262716 2324 ntBASIC6.76□□□□□ -1.33
RGPD3A6NKT7 HMGB3P7-201ENST00000400214 611 ntBASIC6.76□□□□□ -1.33
RGPD3A6NKT7 MIR1193-201ENST00000408109 78 ntBASIC6.76□□□□□ -1.33
RGPD3A6NKT7 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC6.76□□□□□ -1.33
RGPD3A6NKT7 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC6.76□□□□□ -1.33
RGPD3A6NKT7 RPS27AP6-201ENST00000427962 448 ntBASIC6.76□□□□□ -1.33
RGPD3A6NKT7 AL365220.1-201ENST00000432923 399 ntBASIC6.76□□□□□ -1.33
RGPD3A6NKT7 AL354714.3-201ENST00000447284 493 ntBASIC6.76□□□□□ -1.33
RGPD3A6NKT7 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.76□□□□□ -1.33
RGPD3A6NKT7 AC058823.1-201ENST00000485315 474 ntBASIC6.76□□□□□ -1.33
RGPD3A6NKT7 AC093720.1-201ENST00000505681 714 ntBASIC6.76□□□□□ -1.33
RGPD3A6NKT7 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC6.76□□□□□ -1.33
RGPD3A6NKT7 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC6.76□□□□□ -1.33
RGPD3A6NKT7 BNIP3P22-201ENST00000593399 556 ntBASIC6.76□□□□□ -1.33
RGPD3A6NKT7 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.76□□□□□ -1.33
RGPD3A6NKT7 AL020997.2-201ENST00000602607 184 ntBASIC6.76□□□□□ -1.33
RGPD3A6NKT7 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
RGPD3A6NKT7 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
RGPD3A6NKT7 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RGPD3A6NKT7 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RGPD3A6NKT7 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
RGPD3A6NKT7 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
RGPD3A6NKT7 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RGPD3A6NKT7 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RGPD3A6NKT7 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RGPD3A6NKT7 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.76□□□□□ -1.33
RGPD3A6NKT7 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
RGPD3A6NKT7 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RGPD3A6NKT7 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC6.75□□□□□ -1.33
RGPD3A6NKT7 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC6.75□□□□□ -1.33
RGPD3A6NKT7 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RGPD3A6NKT7 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
RGPD3A6NKT7 AL009179.1-201ENST00000406085 265 ntBASIC6.75□□□□□ -1.33
RGPD3A6NKT7 MIR1182-201ENST00000408363 97 ntBASIC6.75□□□□□ -1.33
RGPD3A6NKT7 RNU4-25P-201ENST00000410569 230 ntBASIC6.75□□□□□ -1.33
RGPD3A6NKT7 RNF10P1-201ENST00000418589 369 ntBASIC6.75□□□□□ -1.33
RGPD3A6NKT7 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.75□□□□□ -1.33
RGPD3A6NKT7 ATP5A1P7-201ENST00000453978 1279 ntBASIC6.75□□□□□ -1.33
RGPD3A6NKT7 AC079080.1-201ENST00000479841 822 ntBASIC6.75□□□□□ -1.33
RGPD3A6NKT7 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC6.75□□□□□ -1.33
RGPD3A6NKT7 BNIP3P5-201ENST00000562290 498 ntBASIC6.75□□□□□ -1.33
RGPD3A6NKT7 PDCD6IPP2-207ENST00000566321 1069 ntBASIC6.75□□□□□ -1.33
RGPD3A6NKT7 AC125494.2-201ENST00000602431 657 ntBASIC6.75□□□□□ -1.33
RGPD3A6NKT7 OR52H1-202ENST00000641796 1061 ntBASIC6.75□□□□□ -1.33
RGPD3A6NKT7 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RGPD3A6NKT7 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.75□□□□□ -1.33
RGPD3A6NKT7 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.75□□□□□ -1.33
RGPD3A6NKT7 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RGPD3A6NKT7 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.75□□□□□ -1.33
RGPD3A6NKT7 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RGPD3A6NKT7 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RGPD3A6NKT7 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.75□□□□□ -1.33
RGPD3A6NKT7 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RGPD3A6NKT7 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RGPD3A6NKT7 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RGPD3A6NKT7 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
RGPD3A6NKT7 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RGPD3A6NKT7 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
RGPD3A6NKT7 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
RGPD3A6NKT7 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RGPD3A6NKT7 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC6.74□□□□□ -1.33
RGPD3A6NKT7 AL445687.2-201ENST00000458156 728 ntBASIC6.74□□□□□ -1.33
RGPD3A6NKT7 SLC25A15P5-201ENST00000508033 253 ntBASIC6.74□□□□□ -1.33
RGPD3A6NKT7 AC109464.1-201ENST00000511091 819 ntBASIC6.74□□□□□ -1.33
RGPD3A6NKT7 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.74□□□□□ -1.33
RGPD3A6NKT7 OR11H3P-201ENST00000554547 982 ntBASIC6.74□□□□□ -1.33
RGPD3A6NKT7 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RGPD3A6NKT7 AC135068.5-201ENST00000624197 983 ntBASIC6.74□□□□□ -1.33
RGPD3A6NKT7 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.74□□□□□ -1.33
RGPD3A6NKT7 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.74□□□□□ -1.33
RGPD3A6NKT7 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RGPD3A6NKT7 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC6.74□□□□□ -1.33
RGPD3A6NKT7 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RGPD3A6NKT7 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RGPD3A6NKT7 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
RGPD3A6NKT7 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RGPD3A6NKT7 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
RGPD3A6NKT7 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RGPD3A6NKT7 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RGPD3A6NKT7 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RGPD3A6NKT7 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RGPD3A6NKT7 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms