Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.98■□□□□ 0.47
RPH3AQ9Y2J0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
RPH3AQ9Y2J0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPH3AQ9Y2J0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RPH3AQ9Y2J0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPH3AQ9Y2J0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.98■□□□□ 0.47
RPH3AQ9Y2J0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.98■□□□□ 0.47
RPH3AQ9Y2J0 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RPH3AQ9Y2J0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RPH3AQ9Y2J0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RPH3AQ9Y2J0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPH3AQ9Y2J0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPH3AQ9Y2J0 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.97■□□□□ 0.47
RPH3AQ9Y2J0 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPH3AQ9Y2J0 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPH3AQ9Y2J0 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPH3AQ9Y2J0 AC239809.2-201ENST00000415381 517 ntBASIC17.97■□□□□ 0.47
RPH3AQ9Y2J0 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.97■□□□□ 0.47
RPH3AQ9Y2J0 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.97■□□□□ 0.47
RPH3AQ9Y2J0 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
RPH3AQ9Y2J0 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.97■□□□□ 0.47
RPH3AQ9Y2J0 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.97■□□□□ 0.47
RPH3AQ9Y2J0 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPH3AQ9Y2J0 AL359736.2-201ENST00000621992 437 ntBASIC17.97■□□□□ 0.47
RPH3AQ9Y2J0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPH3AQ9Y2J0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RPH3AQ9Y2J0 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
RPH3AQ9Y2J0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPH3AQ9Y2J0 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RPH3AQ9Y2J0 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.96■□□□□ 0.47
RPH3AQ9Y2J0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPH3AQ9Y2J0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPH3AQ9Y2J0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RPH3AQ9Y2J0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPH3AQ9Y2J0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.96■□□□□ 0.47
RPH3AQ9Y2J0 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.96■□□□□ 0.47
RPH3AQ9Y2J0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPH3AQ9Y2J0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.96■□□□□ 0.47
RPH3AQ9Y2J0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RPH3AQ9Y2J0 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.96■□□□□ 0.47
RPH3AQ9Y2J0 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPH3AQ9Y2J0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPH3AQ9Y2J0 KRASP1-201ENST00000407852 552 ntBASIC17.96■□□□□ 0.47
RPH3AQ9Y2J0 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RPH3AQ9Y2J0 FAM210CP-201ENST00000445714 574 ntBASIC17.96■□□□□ 0.47
RPH3AQ9Y2J0 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.96■□□□□ 0.47
RPH3AQ9Y2J0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.96■□□□□ 0.47
RPH3AQ9Y2J0 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.96■□□□□ 0.47
RPH3AQ9Y2J0 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.96■□□□□ 0.47
RPH3AQ9Y2J0 AL121829.2-201ENST00000620908 328 ntBASIC17.96■□□□□ 0.47
RPH3AQ9Y2J0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPH3AQ9Y2J0 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPH3AQ9Y2J0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.96■□□□□ 0.47
RPH3AQ9Y2J0 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPH3AQ9Y2J0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RPH3AQ9Y2J0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPH3AQ9Y2J0 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPH3AQ9Y2J0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.96■□□□□ 0.47
RPH3AQ9Y2J0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPH3AQ9Y2J0 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPH3AQ9Y2J0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RPH3AQ9Y2J0 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.95■□□□□ 0.46
RPH3AQ9Y2J0 PHGDH-210ENST00000641115 1638 ntBASIC17.95■□□□□ 0.46
RPH3AQ9Y2J0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.95■□□□□ 0.46
RPH3AQ9Y2J0 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPH3AQ9Y2J0 AL691432.2-201ENST00000607222 2038 ntBASIC17.95■□□□□ 0.46
RPH3AQ9Y2J0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RPH3AQ9Y2J0 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.95■□□□□ 0.46
RPH3AQ9Y2J0 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RPH3AQ9Y2J0 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPH3AQ9Y2J0 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.95■□□□□ 0.46
RPH3AQ9Y2J0 AC008550.1-201ENST00000511500 884 ntBASIC17.95■□□□□ 0.46
RPH3AQ9Y2J0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.95■□□□□ 0.46
RPH3AQ9Y2J0 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.95■□□□□ 0.46
RPH3AQ9Y2J0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
RPH3AQ9Y2J0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPH3AQ9Y2J0 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPH3AQ9Y2J0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPH3AQ9Y2J0 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.95■□□□□ 0.46
RPH3AQ9Y2J0 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.95■□□□□ 0.46
RPH3AQ9Y2J0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPH3AQ9Y2J0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.95■□□□□ 0.46
RPH3AQ9Y2J0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RPH3AQ9Y2J0 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RPH3AQ9Y2J0 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.94■□□□□ 0.46
RPH3AQ9Y2J0 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPH3AQ9Y2J0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPH3AQ9Y2J0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RPH3AQ9Y2J0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPH3AQ9Y2J0 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPH3AQ9Y2J0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
RPH3AQ9Y2J0 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPH3AQ9Y2J0 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.94■□□□□ 0.46
RPH3AQ9Y2J0 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
RPH3AQ9Y2J0 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.94■□□□□ 0.46
RPH3AQ9Y2J0 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RPH3AQ9Y2J0 ECEL1P3-201ENST00000427961 737 ntBASIC17.94■□□□□ 0.46
RPH3AQ9Y2J0 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RPH3AQ9Y2J0 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.94■□□□□ 0.46
RPH3AQ9Y2J0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms