Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
PCDHGB4Q9UN71 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PCDHGB4Q9UN71 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGB4Q9UN71 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGB4Q9UN71 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGB4Q9UN71 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHGB4Q9UN71 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PCDHGB4Q9UN71 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB4Q9UN71 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB4Q9UN71 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
PCDHGB4Q9UN71 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB4Q9UN71 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB4Q9UN71 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB4Q9UN71 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB4Q9UN71 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB4Q9UN71 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB4Q9UN71 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
PCDHGB4Q9UN71 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHGB4Q9UN71 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB4Q9UN71 BCL2-203ENST00000589955 5011 ntBASIC18.98■□□□□ 0.63
PCDHGB4Q9UN71 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHGB4Q9UN71 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB4Q9UN71 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHGB4Q9UN71 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB4Q9UN71 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PCDHGB4Q9UN71 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
PCDHGB4Q9UN71 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB4Q9UN71 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHGB4Q9UN71 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB4Q9UN71 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PCDHGB4Q9UN71 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHGB4Q9UN71 AL049812.1-201ENST00000432563 2267 ntBASIC18.98■□□□□ 0.63
PCDHGB4Q9UN71 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB4Q9UN71 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PCDHGB4Q9UN71 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB4Q9UN71 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB4Q9UN71 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB4Q9UN71 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB4Q9UN71 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PCDHGB4Q9UN71 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB4Q9UN71 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
PCDHGB4Q9UN71 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB4Q9UN71 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHGB4Q9UN71 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PCDHGB4Q9UN71 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.97■□□□□ 0.63
PCDHGB4Q9UN71 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDHGB4Q9UN71 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.97■□□□□ 0.63
PCDHGB4Q9UN71 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDHGB4Q9UN71 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB4Q9UN71 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PCDHGB4Q9UN71 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB4Q9UN71 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB4Q9UN71 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDHGB4Q9UN71 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB4Q9UN71 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB4Q9UN71 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PCDHGB4Q9UN71 TMEM179-206ENST00000616017 1645 ntBASIC18.96■□□□□ 0.63
PCDHGB4Q9UN71 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDHGB4Q9UN71 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB4Q9UN71 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB4Q9UN71 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB4Q9UN71 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHGB4Q9UN71 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB4Q9UN71 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.96■□□□□ 0.63
PCDHGB4Q9UN71 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.96■□□□□ 0.63
PCDHGB4Q9UN71 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB4Q9UN71 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
PCDHGB4Q9UN71 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHGB4Q9UN71 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
PCDHGB4Q9UN71 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB4Q9UN71 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB4Q9UN71 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB4Q9UN71 RARRES2P6-201ENST00000567333 442 ntBASIC18.96■□□□□ 0.63
PCDHGB4Q9UN71 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDHGB4Q9UN71 AC016405.3-201ENST00000607710 860 ntBASIC18.96■□□□□ 0.63
PCDHGB4Q9UN71 AC100791.3-201ENST00000617619 330 ntBASIC18.96■□□□□ 0.63
PCDHGB4Q9UN71 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB4Q9UN71 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB4Q9UN71 AL691432.2-201ENST00000607222 2038 ntBASIC18.96■□□□□ 0.63
PCDHGB4Q9UN71 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB4Q9UN71 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB4Q9UN71 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHGB4Q9UN71 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB4Q9UN71 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHGB4Q9UN71 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB4Q9UN71 AC090340.1-201ENST00000620778 4980 ntBASIC18.95■□□□□ 0.62
PCDHGB4Q9UN71 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB4Q9UN71 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PCDHGB4Q9UN71 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB4Q9UN71 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.95■□□□□ 0.62
PCDHGB4Q9UN71 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB4Q9UN71 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
PCDHGB4Q9UN71 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB4Q9UN71 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB4Q9UN71 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB4Q9UN71 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
PCDHGB4Q9UN71 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.95■□□□□ 0.62
PCDHGB4Q9UN71 MCRIP2P1-201ENST00000394346 511 ntBASIC18.95■□□□□ 0.62
PCDHGB4Q9UN71 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
PCDHGB4Q9UN71 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms