Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPARGC1AQ9UBK2 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PPARGC1AQ9UBK2 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPARGC1AQ9UBK2 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPARGC1AQ9UBK2 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPARGC1AQ9UBK2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPARGC1AQ9UBK2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPARGC1AQ9UBK2 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PPARGC1AQ9UBK2 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PPARGC1AQ9UBK2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PPARGC1AQ9UBK2 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PPARGC1AQ9UBK2 TCF3P1-201ENST00000423021 1937 ntBASIC20.41■□□□□ 0.86
PPARGC1AQ9UBK2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.41■□□□□ 0.86
PPARGC1AQ9UBK2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.41■□□□□ 0.86
PPARGC1AQ9UBK2 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
PPARGC1AQ9UBK2 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
PPARGC1AQ9UBK2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PPARGC1AQ9UBK2 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PPARGC1AQ9UBK2 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PPARGC1AQ9UBK2 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.41■□□□□ 0.86
PPARGC1AQ9UBK2 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PPARGC1AQ9UBK2 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.41■□□□□ 0.86
PPARGC1AQ9UBK2 AC233263.1-201ENST00000578059 224 ntBASIC20.41■□□□□ 0.86
PPARGC1AQ9UBK2 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.41■□□□□ 0.86
PPARGC1AQ9UBK2 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PPARGC1AQ9UBK2 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PPARGC1AQ9UBK2 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PPARGC1AQ9UBK2 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PPARGC1AQ9UBK2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PPARGC1AQ9UBK2 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.41■□□□□ 0.86
PPARGC1AQ9UBK2 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PPARGC1AQ9UBK2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.41■□□□□ 0.86
PPARGC1AQ9UBK2 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PPARGC1AQ9UBK2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.41■□□□□ 0.86
PPARGC1AQ9UBK2 AC112907.3-201ENST00000577781 2400 ntBASIC20.41■□□□□ 0.86
PPARGC1AQ9UBK2 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PPARGC1AQ9UBK2 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PPARGC1AQ9UBK2 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PPARGC1AQ9UBK2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PPARGC1AQ9UBK2 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PPARGC1AQ9UBK2 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PPARGC1AQ9UBK2 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.4■□□□□ 0.86
PPARGC1AQ9UBK2 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PPARGC1AQ9UBK2 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PPARGC1AQ9UBK2 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PPARGC1AQ9UBK2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PPARGC1AQ9UBK2 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.4■□□□□ 0.86
PPARGC1AQ9UBK2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PPARGC1AQ9UBK2 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.4■□□□□ 0.86
PPARGC1AQ9UBK2 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PPARGC1AQ9UBK2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.4■□□□□ 0.86
PPARGC1AQ9UBK2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.4■□□□□ 0.86
PPARGC1AQ9UBK2 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PPARGC1AQ9UBK2 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.4■□□□□ 0.86
PPARGC1AQ9UBK2 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.4■□□□□ 0.86
PPARGC1AQ9UBK2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PPARGC1AQ9UBK2 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PPARGC1AQ9UBK2 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
PPARGC1AQ9UBK2 MTDHP1-201ENST00000605323 784 ntBASIC20.4■□□□□ 0.86
PPARGC1AQ9UBK2 AC018553.1-201ENST00000616682 1458 ntBASIC20.4■□□□□ 0.86
PPARGC1AQ9UBK2 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PPARGC1AQ9UBK2 AP001271.2-201ENST00000624018 1556 ntBASIC20.4■□□□□ 0.86
PPARGC1AQ9UBK2 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
PPARGC1AQ9UBK2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
PPARGC1AQ9UBK2 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.39■□□□□ 0.86
PPARGC1AQ9UBK2 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
PPARGC1AQ9UBK2 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.39■□□□□ 0.86
PPARGC1AQ9UBK2 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.39■□□□□ 0.86
PPARGC1AQ9UBK2 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PPARGC1AQ9UBK2 TFP1-202ENST00000475455 1573 ntBASIC20.39■□□□□ 0.85
PPARGC1AQ9UBK2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
PPARGC1AQ9UBK2 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PPARGC1AQ9UBK2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
PPARGC1AQ9UBK2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PPARGC1AQ9UBK2 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PPARGC1AQ9UBK2 KRT18P29-201ENST00000397031 1267 ntBASIC20.39■□□□□ 0.85
PPARGC1AQ9UBK2 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
PPARGC1AQ9UBK2 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
PPARGC1AQ9UBK2 RN7SL471P-201ENST00000580476 299 ntBASIC20.39■□□□□ 0.85
PPARGC1AQ9UBK2 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.39■□□□□ 0.85
PPARGC1AQ9UBK2 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.39■□□□□ 0.85
PPARGC1AQ9UBK2 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.39■□□□□ 0.85
PPARGC1AQ9UBK2 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
PPARGC1AQ9UBK2 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
PPARGC1AQ9UBK2 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PPARGC1AQ9UBK2 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PPARGC1AQ9UBK2 AC087289.5-201ENST00000586076 3175 ntBASIC20.39■□□□□ 0.85
PPARGC1AQ9UBK2 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
PPARGC1AQ9UBK2 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
PPARGC1AQ9UBK2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PPARGC1AQ9UBK2 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
PPARGC1AQ9UBK2 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.38■□□□□ 0.85
PPARGC1AQ9UBK2 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PPARGC1AQ9UBK2 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PPARGC1AQ9UBK2 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PPARGC1AQ9UBK2 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PPARGC1AQ9UBK2 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
PPARGC1AQ9UBK2 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PPARGC1AQ9UBK2 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PPARGC1AQ9UBK2 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms