Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CXXC1Q9P0U4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CXXC1Q9P0U4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.15■□□□□ 0.98
CXXC1Q9P0U4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CXXC1Q9P0U4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.15■□□□□ 0.98
CXXC1Q9P0U4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CXXC1Q9P0U4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CXXC1Q9P0U4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CXXC1Q9P0U4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.15■□□□□ 0.98
CXXC1Q9P0U4 AC246785.2-201ENST00000432512 513 ntBASIC21.15■□□□□ 0.98
CXXC1Q9P0U4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.15■□□□□ 0.98
CXXC1Q9P0U4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
CXXC1Q9P0U4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.15■□□□□ 0.98
CXXC1Q9P0U4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CXXC1Q9P0U4 AC083849.1-201ENST00000615227 514 ntBASIC21.15■□□□□ 0.98
CXXC1Q9P0U4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.15■□□□□ 0.98
CXXC1Q9P0U4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CXXC1Q9P0U4 PLK5-205ENST00000642079 1969 ntBASIC21.15■□□□□ 0.98
CXXC1Q9P0U4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CXXC1Q9P0U4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CXXC1Q9P0U4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CXXC1Q9P0U4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CXXC1Q9P0U4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CXXC1Q9P0U4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.14■□□□□ 0.98
CXXC1Q9P0U4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CXXC1Q9P0U4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CXXC1Q9P0U4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CXXC1Q9P0U4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.14■□□□□ 0.98
CXXC1Q9P0U4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CXXC1Q9P0U4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CXXC1Q9P0U4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CXXC1Q9P0U4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CXXC1Q9P0U4 TSPY21P-201ENST00000433481 731 ntBASIC21.14■□□□□ 0.97
CXXC1Q9P0U4 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CXXC1Q9P0U4 TSPY23P-201ENST00000440136 739 ntBASIC21.14■□□□□ 0.97
CXXC1Q9P0U4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CXXC1Q9P0U4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.14■□□□□ 0.97
CXXC1Q9P0U4 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CXXC1Q9P0U4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.14■□□□□ 0.97
CXXC1Q9P0U4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CXXC1Q9P0U4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CXXC1Q9P0U4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CXXC1Q9P0U4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CXXC1Q9P0U4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CXXC1Q9P0U4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.14■□□□□ 0.97
CXXC1Q9P0U4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.13■□□□□ 0.97
CXXC1Q9P0U4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CXXC1Q9P0U4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CXXC1Q9P0U4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CXXC1Q9P0U4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
CXXC1Q9P0U4 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CXXC1Q9P0U4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CXXC1Q9P0U4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
CXXC1Q9P0U4 AC112907.2-201ENST00000448639 330 ntBASIC21.13■□□□□ 0.97
CXXC1Q9P0U4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.13■□□□□ 0.97
CXXC1Q9P0U4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CXXC1Q9P0U4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CXXC1Q9P0U4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CXXC1Q9P0U4 KRT8P45-201ENST00000414328 1447 ntBASIC21.12■□□□□ 0.97
CXXC1Q9P0U4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CXXC1Q9P0U4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CXXC1Q9P0U4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CXXC1Q9P0U4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CXXC1Q9P0U4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CXXC1Q9P0U4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CXXC1Q9P0U4 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.12■□□□□ 0.97
CXXC1Q9P0U4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CXXC1Q9P0U4 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CXXC1Q9P0U4 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CXXC1Q9P0U4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CXXC1Q9P0U4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC21.12■□□□□ 0.97
CXXC1Q9P0U4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CXXC1Q9P0U4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.12■□□□□ 0.97
CXXC1Q9P0U4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.12■□□□□ 0.97
CXXC1Q9P0U4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CXXC1Q9P0U4 AP003041.3-201ENST00000527151 707 ntBASIC21.12■□□□□ 0.97
CXXC1Q9P0U4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.12■□□□□ 0.97
CXXC1Q9P0U4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.12■□□□□ 0.97
CXXC1Q9P0U4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.12■□□□□ 0.97
CXXC1Q9P0U4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CXXC1Q9P0U4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CXXC1Q9P0U4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CXXC1Q9P0U4 PHGDH-210ENST00000641115 1638 ntBASIC21.11■□□□□ 0.97
CXXC1Q9P0U4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CXXC1Q9P0U4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CXXC1Q9P0U4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.11■□□□□ 0.97
CXXC1Q9P0U4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CXXC1Q9P0U4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.11■□□□□ 0.97
CXXC1Q9P0U4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CXXC1Q9P0U4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.11■□□□□ 0.97
CXXC1Q9P0U4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.11■□□□□ 0.97
CXXC1Q9P0U4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.11■□□□□ 0.97
CXXC1Q9P0U4 ZNF444P1-201ENST00000559497 298 ntBASIC21.11■□□□□ 0.97
CXXC1Q9P0U4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.11■□□□□ 0.97
CXXC1Q9P0U4 HYMAI.1-201ENST00000620949 238 ntBASIC21.11■□□□□ 0.97
CXXC1Q9P0U4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CXXC1Q9P0U4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.11■□□□□ 0.97
CXXC1Q9P0U4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.11■□□□□ 0.97
CXXC1Q9P0U4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CXXC1Q9P0U4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms