Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.99■□□□□ 0.79
UBP1Q9NZI7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBP1Q9NZI7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBP1Q9NZI7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBP1Q9NZI7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBP1Q9NZI7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.98■□□□□ 0.79
UBP1Q9NZI7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBP1Q9NZI7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBP1Q9NZI7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBP1Q9NZI7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
UBP1Q9NZI7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBP1Q9NZI7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBP1Q9NZI7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
UBP1Q9NZI7 AC007952.6-201ENST00000573168 2673 ntBASIC19.98■□□□□ 0.79
UBP1Q9NZI7 AC003957.1-201ENST00000625108 2673 ntBASIC19.98■□□□□ 0.79
UBP1Q9NZI7 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBP1Q9NZI7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBP1Q9NZI7 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBP1Q9NZI7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBP1Q9NZI7 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.98■□□□□ 0.79
UBP1Q9NZI7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
UBP1Q9NZI7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.98■□□□□ 0.79
UBP1Q9NZI7 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.98■□□□□ 0.79
UBP1Q9NZI7 UNC93B4-201ENST00000505679 747 ntBASIC19.98■□□□□ 0.79
UBP1Q9NZI7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBP1Q9NZI7 UNC93B5-201ENST00000530315 699 ntBASIC19.98■□□□□ 0.79
UBP1Q9NZI7 KRT18P6-201ENST00000555540 1265 ntBASIC19.98■□□□□ 0.79
UBP1Q9NZI7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.98■□□□□ 0.79
UBP1Q9NZI7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
UBP1Q9NZI7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
UBP1Q9NZI7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
UBP1Q9NZI7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBP1Q9NZI7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.98■□□□□ 0.79
UBP1Q9NZI7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBP1Q9NZI7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.98■□□□□ 0.79
UBP1Q9NZI7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
UBP1Q9NZI7 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
UBP1Q9NZI7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
UBP1Q9NZI7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
UBP1Q9NZI7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBP1Q9NZI7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBP1Q9NZI7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBP1Q9NZI7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBP1Q9NZI7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.97■□□□□ 0.79
UBP1Q9NZI7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
UBP1Q9NZI7 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBP1Q9NZI7 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBP1Q9NZI7 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBP1Q9NZI7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBP1Q9NZI7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.97■□□□□ 0.79
UBP1Q9NZI7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.97■□□□□ 0.79
UBP1Q9NZI7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.97■□□□□ 0.79
UBP1Q9NZI7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.97■□□□□ 0.79
UBP1Q9NZI7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.97■□□□□ 0.79
UBP1Q9NZI7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.97■□□□□ 0.79
UBP1Q9NZI7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBP1Q9NZI7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBP1Q9NZI7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBP1Q9NZI7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.97■□□□□ 0.79
UBP1Q9NZI7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
UBP1Q9NZI7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBP1Q9NZI7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBP1Q9NZI7 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBP1Q9NZI7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBP1Q9NZI7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UBP1Q9NZI7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
UBP1Q9NZI7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.96■□□□□ 0.79
UBP1Q9NZI7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.96■□□□□ 0.79
UBP1Q9NZI7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBP1Q9NZI7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBP1Q9NZI7 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.96■□□□□ 0.79
UBP1Q9NZI7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.96■□□□□ 0.79
UBP1Q9NZI7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.96■□□□□ 0.79
UBP1Q9NZI7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.96■□□□□ 0.79
UBP1Q9NZI7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBP1Q9NZI7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
UBP1Q9NZI7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
UBP1Q9NZI7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBP1Q9NZI7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.96■□□□□ 0.79
UBP1Q9NZI7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBP1Q9NZI7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
UBP1Q9NZI7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBP1Q9NZI7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBP1Q9NZI7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBP1Q9NZI7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.95■□□□□ 0.78
UBP1Q9NZI7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.95■□□□□ 0.78
UBP1Q9NZI7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBP1Q9NZI7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBP1Q9NZI7 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
UBP1Q9NZI7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UBP1Q9NZI7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.95■□□□□ 0.78
UBP1Q9NZI7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UBP1Q9NZI7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBP1Q9NZI7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBP1Q9NZI7 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBP1Q9NZI7 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBP1Q9NZI7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.95■□□□□ 0.78
UBP1Q9NZI7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
UBP1Q9NZI7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.95■□□□□ 0.78
UBP1Q9NZI7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms