Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.59■■□□□ 1.05
SPTLC3Q9NUV7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.59■■□□□ 1.05
SPTLC3Q9NUV7 SLC7A5P1-201ENST00000568957 537 ntBASIC21.59■■□□□ 1.05
SPTLC3Q9NUV7 FAM21FP-204ENST00000608637 956 ntBASIC21.59■■□□□ 1.05
SPTLC3Q9NUV7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.59■■□□□ 1.05
SPTLC3Q9NUV7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.59■■□□□ 1.05
SPTLC3Q9NUV7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.59■■□□□ 1.05
SPTLC3Q9NUV7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SPTLC3Q9NUV7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SPTLC3Q9NUV7 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.58■■□□□ 1.05
SPTLC3Q9NUV7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.58■■□□□ 1.05
SPTLC3Q9NUV7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.58■■□□□ 1.05
SPTLC3Q9NUV7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SPTLC3Q9NUV7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.58■■□□□ 1.05
SPTLC3Q9NUV7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.58■■□□□ 1.05
SPTLC3Q9NUV7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SPTLC3Q9NUV7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC21.58■■□□□ 1.05
SPTLC3Q9NUV7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC21.58■■□□□ 1.05
SPTLC3Q9NUV7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SPTLC3Q9NUV7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SPTLC3Q9NUV7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SPTLC3Q9NUV7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
SPTLC3Q9NUV7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SPTLC3Q9NUV7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.58■■□□□ 1.05
SPTLC3Q9NUV7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
SPTLC3Q9NUV7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.58■■□□□ 1.05
SPTLC3Q9NUV7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.58■■□□□ 1.05
SPTLC3Q9NUV7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SPTLC3Q9NUV7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.58■■□□□ 1.05
SPTLC3Q9NUV7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SPTLC3Q9NUV7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.58■■□□□ 1.04
SPTLC3Q9NUV7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.58■■□□□ 1.04
SPTLC3Q9NUV7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SPTLC3Q9NUV7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.58■■□□□ 1.04
SPTLC3Q9NUV7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SPTLC3Q9NUV7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.57■■□□□ 1.04
SPTLC3Q9NUV7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SPTLC3Q9NUV7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.57■■□□□ 1.04
SPTLC3Q9NUV7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.57■■□□□ 1.04
SPTLC3Q9NUV7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SPTLC3Q9NUV7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SPTLC3Q9NUV7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SPTLC3Q9NUV7 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SPTLC3Q9NUV7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SPTLC3Q9NUV7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SPTLC3Q9NUV7 MIR638-201ENST00000385237 100 ntBASIC21.57■■□□□ 1.04
SPTLC3Q9NUV7 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.57■■□□□ 1.04
SPTLC3Q9NUV7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SPTLC3Q9NUV7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SPTLC3Q9NUV7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
SPTLC3Q9NUV7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SPTLC3Q9NUV7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SPTLC3Q9NUV7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SPTLC3Q9NUV7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SPTLC3Q9NUV7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.57■■□□□ 1.04
SPTLC3Q9NUV7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SPTLC3Q9NUV7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SPTLC3Q9NUV7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SPTLC3Q9NUV7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SPTLC3Q9NUV7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
SPTLC3Q9NUV7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SPTLC3Q9NUV7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
SPTLC3Q9NUV7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SPTLC3Q9NUV7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.56■■□□□ 1.04
SPTLC3Q9NUV7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SPTLC3Q9NUV7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SPTLC3Q9NUV7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SPTLC3Q9NUV7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.56■■□□□ 1.04
SPTLC3Q9NUV7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.56■■□□□ 1.04
SPTLC3Q9NUV7 UBE2DNL-204ENST00000602536 740 ntBASIC21.56■■□□□ 1.04
SPTLC3Q9NUV7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.56■■□□□ 1.04
SPTLC3Q9NUV7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SPTLC3Q9NUV7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SPTLC3Q9NUV7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
SPTLC3Q9NUV7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SPTLC3Q9NUV7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SPTLC3Q9NUV7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SPTLC3Q9NUV7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SPTLC3Q9NUV7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SPTLC3Q9NUV7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.56■■□□□ 1.04
SPTLC3Q9NUV7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SPTLC3Q9NUV7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.56■■□□□ 1.04
SPTLC3Q9NUV7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC21.56■■□□□ 1.04
SPTLC3Q9NUV7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPTLC3Q9NUV7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.55■■□□□ 1.04
SPTLC3Q9NUV7 WIZP1-201ENST00000531444 2299 ntBASIC21.55■■□□□ 1.04
SPTLC3Q9NUV7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.55■■□□□ 1.04
SPTLC3Q9NUV7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SPTLC3Q9NUV7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPTLC3Q9NUV7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SPTLC3Q9NUV7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC21.55■■□□□ 1.04
SPTLC3Q9NUV7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.55■■□□□ 1.04
SPTLC3Q9NUV7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPTLC3Q9NUV7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SPTLC3Q9NUV7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPTLC3Q9NUV7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
SPTLC3Q9NUV7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SPTLC3Q9NUV7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPTLC3Q9NUV7 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.55■■□□□ 1.04
SPTLC3Q9NUV7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms