Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LIN7CQ9NUP9 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.29■□□□□ 0.2
LIN7CQ9NUP9 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
LIN7CQ9NUP9 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LIN7CQ9NUP9 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LIN7CQ9NUP9 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LIN7CQ9NUP9 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LIN7CQ9NUP9 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LIN7CQ9NUP9 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LIN7CQ9NUP9 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LIN7CQ9NUP9 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIN7CQ9NUP9 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.28■□□□□ 0.2
LIN7CQ9NUP9 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LIN7CQ9NUP9 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIN7CQ9NUP9 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIN7CQ9NUP9 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.28■□□□□ 0.2
LIN7CQ9NUP9 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIN7CQ9NUP9 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIN7CQ9NUP9 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LIN7CQ9NUP9 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIN7CQ9NUP9 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LIN7CQ9NUP9 TSPY6P-201ENST00000448518 926 ntBASIC16.28■□□□□ 0.2
LIN7CQ9NUP9 AC093787.1-201ENST00000450396 207 ntBASIC16.28■□□□□ 0.2
LIN7CQ9NUP9 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.28■□□□□ 0.2
LIN7CQ9NUP9 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.28■□□□□ 0.2
LIN7CQ9NUP9 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIN7CQ9NUP9 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LIN7CQ9NUP9 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.28■□□□□ 0.2
LIN7CQ9NUP9 AL109923.1-201ENST00000618799 583 ntBASIC16.28■□□□□ 0.2
LIN7CQ9NUP9 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.28■□□□□ 0.2
LIN7CQ9NUP9 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIN7CQ9NUP9 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIN7CQ9NUP9 AP001271.2-201ENST00000624018 1556 ntBASIC16.28■□□□□ 0.2
LIN7CQ9NUP9 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.28■□□□□ 0.2
LIN7CQ9NUP9 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIN7CQ9NUP9 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.28■□□□□ 0.2
LIN7CQ9NUP9 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.28■□□□□ 0.2
LIN7CQ9NUP9 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LIN7CQ9NUP9 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIN7CQ9NUP9 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIN7CQ9NUP9 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.28■□□□□ 0.2
LIN7CQ9NUP9 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LIN7CQ9NUP9 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
LIN7CQ9NUP9 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LIN7CQ9NUP9 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.27■□□□□ 0.2
LIN7CQ9NUP9 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LIN7CQ9NUP9 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.27■□□□□ 0.2
LIN7CQ9NUP9 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LIN7CQ9NUP9 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
LIN7CQ9NUP9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
LIN7CQ9NUP9 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LIN7CQ9NUP9 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LIN7CQ9NUP9 ID1-201ENST00000376105 1233 ntBASIC16.27■□□□□ 0.2
LIN7CQ9NUP9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.27■□□□□ 0.2
LIN7CQ9NUP9 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.27■□□□□ 0.2
LIN7CQ9NUP9 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.27■□□□□ 0.2
LIN7CQ9NUP9 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.27■□□□□ 0.2
LIN7CQ9NUP9 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.27■□□□□ 0.2
LIN7CQ9NUP9 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.27■□□□□ 0.2
LIN7CQ9NUP9 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LIN7CQ9NUP9 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LIN7CQ9NUP9 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LIN7CQ9NUP9 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
LIN7CQ9NUP9 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
LIN7CQ9NUP9 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LIN7CQ9NUP9 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LIN7CQ9NUP9 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
LIN7CQ9NUP9 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LIN7CQ9NUP9 KRT8P17-201ENST00000453110 1448 ntBASIC16.27■□□□□ 0.19
LIN7CQ9NUP9 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LIN7CQ9NUP9 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LIN7CQ9NUP9 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.27■□□□□ 0.19
LIN7CQ9NUP9 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LIN7CQ9NUP9 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LIN7CQ9NUP9 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LIN7CQ9NUP9 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LIN7CQ9NUP9 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.26■□□□□ 0.19
LIN7CQ9NUP9 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LIN7CQ9NUP9 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.26■□□□□ 0.19
LIN7CQ9NUP9 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LIN7CQ9NUP9 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LIN7CQ9NUP9 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LIN7CQ9NUP9 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LIN7CQ9NUP9 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.26■□□□□ 0.19
LIN7CQ9NUP9 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LIN7CQ9NUP9 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.26■□□□□ 0.19
LIN7CQ9NUP9 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.26■□□□□ 0.19
LIN7CQ9NUP9 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LIN7CQ9NUP9 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.26■□□□□ 0.19
LIN7CQ9NUP9 CYP2T3P-201ENST00000601990 817 ntBASIC16.26■□□□□ 0.19
LIN7CQ9NUP9 AL031963.3-201ENST00000606441 850 ntBASIC16.26■□□□□ 0.19
LIN7CQ9NUP9 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LIN7CQ9NUP9 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.26■□□□□ 0.19
LIN7CQ9NUP9 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LIN7CQ9NUP9 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LIN7CQ9NUP9 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LIN7CQ9NUP9 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
LIN7CQ9NUP9 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.26■□□□□ 0.19
LIN7CQ9NUP9 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LIN7CQ9NUP9 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms