Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.64■□□□□ 0.57
CCM2LQ9NUG4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.64■□□□□ 0.57
CCM2LQ9NUG4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CCM2LQ9NUG4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CCM2LQ9NUG4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.64■□□□□ 0.57
CCM2LQ9NUG4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCM2LQ9NUG4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.64■□□□□ 0.57
CCM2LQ9NUG4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCM2LQ9NUG4 AC007613.1-201ENST00000572811 2597 ntBASIC18.64■□□□□ 0.57
CCM2LQ9NUG4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.64■□□□□ 0.57
CCM2LQ9NUG4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCM2LQ9NUG4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CCM2LQ9NUG4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCM2LQ9NUG4 AL049812.1-201ENST00000432563 2267 ntBASIC18.63■□□□□ 0.57
CCM2LQ9NUG4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2LQ9NUG4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2LQ9NUG4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2LQ9NUG4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2LQ9NUG4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2LQ9NUG4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2LQ9NUG4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CCM2LQ9NUG4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2LQ9NUG4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.63■□□□□ 0.57
CCM2LQ9NUG4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCM2LQ9NUG4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2LQ9NUG4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2LQ9NUG4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.63■□□□□ 0.57
CCM2LQ9NUG4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2LQ9NUG4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.63■□□□□ 0.57
CCM2LQ9NUG4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.63■□□□□ 0.57
CCM2LQ9NUG4 AC231657.2-201ENST00000624556 255 ntBASIC18.63■□□□□ 0.57
CCM2LQ9NUG4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.63■□□□□ 0.57
CCM2LQ9NUG4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.63■□□□□ 0.57
CCM2LQ9NUG4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2LQ9NUG4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CCM2LQ9NUG4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2LQ9NUG4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2LQ9NUG4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2LQ9NUG4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.63■□□□□ 0.57
CCM2LQ9NUG4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2LQ9NUG4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CCM2LQ9NUG4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2LQ9NUG4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2LQ9NUG4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCM2LQ9NUG4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCM2LQ9NUG4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCM2LQ9NUG4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCM2LQ9NUG4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCM2LQ9NUG4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCM2LQ9NUG4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
CCM2LQ9NUG4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCM2LQ9NUG4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCM2LQ9NUG4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCM2LQ9NUG4 AC091799.1-201ENST00000422823 811 ntBASIC18.62■□□□□ 0.57
CCM2LQ9NUG4 AC007322.1-201ENST00000426983 750 ntBASIC18.62■□□□□ 0.57
CCM2LQ9NUG4 GUSBP6-202ENST00000438529 1198 ntBASIC18.62■□□□□ 0.57
CCM2LQ9NUG4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.62■□□□□ 0.57
CCM2LQ9NUG4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCM2LQ9NUG4 SLC7A5P2-201ENST00000553010 536 ntBASIC18.62■□□□□ 0.57
CCM2LQ9NUG4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.62■□□□□ 0.57
CCM2LQ9NUG4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.62■□□□□ 0.57
CCM2LQ9NUG4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCM2LQ9NUG4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCM2LQ9NUG4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.62■□□□□ 0.57
CCM2LQ9NUG4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCM2LQ9NUG4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.62■□□□□ 0.57
CCM2LQ9NUG4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.62■□□□□ 0.57
CCM2LQ9NUG4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCM2LQ9NUG4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCM2LQ9NUG4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCM2LQ9NUG4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCM2LQ9NUG4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCM2LQ9NUG4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCM2LQ9NUG4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCM2LQ9NUG4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCM2LQ9NUG4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCM2LQ9NUG4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCM2LQ9NUG4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCM2LQ9NUG4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCM2LQ9NUG4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CCM2LQ9NUG4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCM2LQ9NUG4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCM2LQ9NUG4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCM2LQ9NUG4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.61■□□□□ 0.57
CCM2LQ9NUG4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCM2LQ9NUG4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCM2LQ9NUG4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.61■□□□□ 0.57
CCM2LQ9NUG4 AC007322.3-201ENST00000426526 701 ntBASIC18.61■□□□□ 0.57
CCM2LQ9NUG4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.61■□□□□ 0.57
CCM2LQ9NUG4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.61■□□□□ 0.57
CCM2LQ9NUG4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.61■□□□□ 0.57
CCM2LQ9NUG4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.61■□□□□ 0.57
CCM2LQ9NUG4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CCM2LQ9NUG4 AC005181.1-201ENST00000604782 1256 ntBASIC18.61■□□□□ 0.57
CCM2LQ9NUG4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCM2LQ9NUG4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCM2LQ9NUG4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCM2LQ9NUG4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCM2LQ9NUG4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.61■□□□□ 0.57
CCM2LQ9NUG4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms