Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC40Q9H9A6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC40Q9H9A6 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC40Q9H9A6 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
LRRC40Q9H9A6 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.94■□□□□ 0.78
LRRC40Q9H9A6 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC40Q9H9A6 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
LRRC40Q9H9A6 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC40Q9H9A6 AC005332.7-201ENST00000614046 2005 ntBASIC19.93■□□□□ 0.78
LRRC40Q9H9A6 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
LRRC40Q9H9A6 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC40Q9H9A6 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
LRRC40Q9H9A6 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC40Q9H9A6 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.93■□□□□ 0.78
LRRC40Q9H9A6 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC40Q9H9A6 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC40Q9H9A6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.93■□□□□ 0.78
LRRC40Q9H9A6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.93■□□□□ 0.78
LRRC40Q9H9A6 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.93■□□□□ 0.78
LRRC40Q9H9A6 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC40Q9H9A6 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC40Q9H9A6 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC40Q9H9A6 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.93■□□□□ 0.78
LRRC40Q9H9A6 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC40Q9H9A6 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
LRRC40Q9H9A6 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC40Q9H9A6 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC40Q9H9A6 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC40Q9H9A6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC40Q9H9A6 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC40Q9H9A6 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC40Q9H9A6 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC40Q9H9A6 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
LRRC40Q9H9A6 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC40Q9H9A6 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC40Q9H9A6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.92■□□□□ 0.78
LRRC40Q9H9A6 RPS2P52-201ENST00000469610 820 ntBASIC19.92■□□□□ 0.78
LRRC40Q9H9A6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.92■□□□□ 0.78
LRRC40Q9H9A6 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.92■□□□□ 0.78
LRRC40Q9H9A6 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.92■□□□□ 0.78
LRRC40Q9H9A6 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.92■□□□□ 0.78
LRRC40Q9H9A6 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
LRRC40Q9H9A6 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.92■□□□□ 0.78
LRRC40Q9H9A6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC40Q9H9A6 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC40Q9H9A6 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC40Q9H9A6 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
LRRC40Q9H9A6 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.92■□□□□ 0.78
LRRC40Q9H9A6 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC40Q9H9A6 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.92■□□□□ 0.78
LRRC40Q9H9A6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC40Q9H9A6 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
LRRC40Q9H9A6 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC40Q9H9A6 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC40Q9H9A6 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC40Q9H9A6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC40Q9H9A6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.91■□□□□ 0.78
LRRC40Q9H9A6 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC40Q9H9A6 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.91■□□□□ 0.78
LRRC40Q9H9A6 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC40Q9H9A6 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.91■□□□□ 0.78
LRRC40Q9H9A6 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.91■□□□□ 0.78
LRRC40Q9H9A6 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC40Q9H9A6 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.91■□□□□ 0.78
LRRC40Q9H9A6 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC40Q9H9A6 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC40Q9H9A6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC40Q9H9A6 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC40Q9H9A6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC40Q9H9A6 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
LRRC40Q9H9A6 AC124283.5-201ENST00000624661 1809 ntBASIC19.9■□□□□ 0.78
LRRC40Q9H9A6 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC40Q9H9A6 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
LRRC40Q9H9A6 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.9■□□□□ 0.78
LRRC40Q9H9A6 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.9■□□□□ 0.78
LRRC40Q9H9A6 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.9■□□□□ 0.78
LRRC40Q9H9A6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.9■□□□□ 0.78
LRRC40Q9H9A6 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.9■□□□□ 0.78
LRRC40Q9H9A6 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.9■□□□□ 0.78
LRRC40Q9H9A6 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.9■□□□□ 0.78
LRRC40Q9H9A6 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.9■□□□□ 0.78
LRRC40Q9H9A6 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
LRRC40Q9H9A6 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.9■□□□□ 0.78
LRRC40Q9H9A6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.9■□□□□ 0.78
LRRC40Q9H9A6 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.9■□□□□ 0.78
LRRC40Q9H9A6 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
LRRC40Q9H9A6 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC40Q9H9A6 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC40Q9H9A6 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC40Q9H9A6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC40Q9H9A6 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC40Q9H9A6 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC40Q9H9A6 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC40Q9H9A6 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.89■□□□□ 0.77
LRRC40Q9H9A6 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.89■□□□□ 0.77
LRRC40Q9H9A6 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.89■□□□□ 0.77
LRRC40Q9H9A6 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.89■□□□□ 0.77
LRRC40Q9H9A6 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.89■□□□□ 0.77
LRRC40Q9H9A6 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC40Q9H9A6 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms