Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.29■□□□□ 0.84
BRD9Q9H8M2 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BRD9Q9H8M2 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.29■□□□□ 0.84
BRD9Q9H8M2 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRD9Q9H8M2 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BRD9Q9H8M2 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRD9Q9H8M2 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRD9Q9H8M2 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRD9Q9H8M2 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRD9Q9H8M2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.28■□□□□ 0.84
BRD9Q9H8M2 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.28■□□□□ 0.84
BRD9Q9H8M2 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
BRD9Q9H8M2 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.28■□□□□ 0.84
BRD9Q9H8M2 AC004980.1-204ENST00000429707 299 ntBASIC20.28■□□□□ 0.84
BRD9Q9H8M2 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRD9Q9H8M2 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.28■□□□□ 0.84
BRD9Q9H8M2 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
BRD9Q9H8M2 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.28■□□□□ 0.84
BRD9Q9H8M2 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRD9Q9H8M2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.28■□□□□ 0.84
BRD9Q9H8M2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.28■□□□□ 0.84
BRD9Q9H8M2 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
BRD9Q9H8M2 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.27■□□□□ 0.84
BRD9Q9H8M2 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
BRD9Q9H8M2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
BRD9Q9H8M2 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
BRD9Q9H8M2 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.27■□□□□ 0.84
BRD9Q9H8M2 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BRD9Q9H8M2 AC018553.1-201ENST00000616682 1458 ntBASIC20.27■□□□□ 0.84
BRD9Q9H8M2 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRD9Q9H8M2 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRD9Q9H8M2 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
BRD9Q9H8M2 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRD9Q9H8M2 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
BRD9Q9H8M2 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
BRD9Q9H8M2 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.27■□□□□ 0.84
BRD9Q9H8M2 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRD9Q9H8M2 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
BRD9Q9H8M2 KRT18P16-201ENST00000510337 1294 ntBASIC20.27■□□□□ 0.84
BRD9Q9H8M2 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.27■□□□□ 0.84
BRD9Q9H8M2 WWOX-216ENST00000569818 525 ntBASIC20.27■□□□□ 0.84
BRD9Q9H8M2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRD9Q9H8M2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BRD9Q9H8M2 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRD9Q9H8M2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.27■□□□□ 0.84
BRD9Q9H8M2 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
BRD9Q9H8M2 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
BRD9Q9H8M2 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
BRD9Q9H8M2 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
BRD9Q9H8M2 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
BRD9Q9H8M2 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
BRD9Q9H8M2 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
BRD9Q9H8M2 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.26■□□□□ 0.83
BRD9Q9H8M2 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.26■□□□□ 0.83
BRD9Q9H8M2 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
BRD9Q9H8M2 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BRD9Q9H8M2 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.26■□□□□ 0.83
BRD9Q9H8M2 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BRD9Q9H8M2 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BRD9Q9H8M2 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BRD9Q9H8M2 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
BRD9Q9H8M2 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.26■□□□□ 0.83
BRD9Q9H8M2 SLC25A1P4-201ENST00000567977 778 ntBASIC20.26■□□□□ 0.83
BRD9Q9H8M2 AC006011.2-201ENST00000621313 1158 ntBASIC20.26■□□□□ 0.83
BRD9Q9H8M2 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BRD9Q9H8M2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
BRD9Q9H8M2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
BRD9Q9H8M2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.26■□□□□ 0.83
BRD9Q9H8M2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.26■□□□□ 0.83
BRD9Q9H8M2 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BRD9Q9H8M2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
BRD9Q9H8M2 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
BRD9Q9H8M2 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
BRD9Q9H8M2 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BRD9Q9H8M2 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BRD9Q9H8M2 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
BRD9Q9H8M2 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BRD9Q9H8M2 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BRD9Q9H8M2 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
BRD9Q9H8M2 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
BRD9Q9H8M2 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
BRD9Q9H8M2 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.25■□□□□ 0.83
BRD9Q9H8M2 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BRD9Q9H8M2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
BRD9Q9H8M2 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
BRD9Q9H8M2 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BRD9Q9H8M2 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BRD9Q9H8M2 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
BRD9Q9H8M2 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BRD9Q9H8M2 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.25■□□□□ 0.83
BRD9Q9H8M2 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.25■□□□□ 0.83
BRD9Q9H8M2 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.24■□□□□ 0.83
BRD9Q9H8M2 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
BRD9Q9H8M2 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.24■□□□□ 0.83
BRD9Q9H8M2 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BRD9Q9H8M2 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BRD9Q9H8M2 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BRD9Q9H8M2 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
BRD9Q9H8M2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
BRD9Q9H8M2 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms