Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.68
PCDH11YQ9BZA8 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC25.57■■□□□ 1.68
PCDH11YQ9BZA8 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
PCDH11YQ9BZA8 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDH11YQ9BZA8 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
PCDH11YQ9BZA8 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
PCDH11YQ9BZA8 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDH11YQ9BZA8 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDH11YQ9BZA8 CD70-202ENST00000423145 881 ntTSL 2 BASIC25.57■■□□□ 1.68
PCDH11YQ9BZA8 TSPY5P-201ENST00000426936 936 ntBASIC25.57■■□□□ 1.68
PCDH11YQ9BZA8 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
PCDH11YQ9BZA8 CLN6-204ENST00000564752 900 ntTSL 3 BASIC25.57■■□□□ 1.68
PCDH11YQ9BZA8 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC25.57■■□□□ 1.68
PCDH11YQ9BZA8 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC25.57■■□□□ 1.68
PCDH11YQ9BZA8 AC141257.4-201ENST00000634557 245 ntBASIC25.57■■□□□ 1.68
PCDH11YQ9BZA8 AC136944.6-201ENST00000634818 245 ntBASIC25.57■■□□□ 1.68
PCDH11YQ9BZA8 BX119927.1-201ENST00000636596 1552 ntBASIC25.57■■□□□ 1.68
PCDH11YQ9BZA8 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
PCDH11YQ9BZA8 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC25.57■■□□□ 1.68
PCDH11YQ9BZA8 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC25.56■■□□□ 1.68
PCDH11YQ9BZA8 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDH11YQ9BZA8 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC25.56■■□□□ 1.68
PCDH11YQ9BZA8 TSPY17P-201ENST00000450329 467 ntBASIC25.56■■□□□ 1.68
PCDH11YQ9BZA8 GXYLT1P6-201ENST00000456472 1187 ntBASIC25.56■■□□□ 1.68
PCDH11YQ9BZA8 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC25.56■■□□□ 1.68
PCDH11YQ9BZA8 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC25.56■■□□□ 1.68
PCDH11YQ9BZA8 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDH11YQ9BZA8 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDH11YQ9BZA8 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDH11YQ9BZA8 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC25.56■■□□□ 1.68
PCDH11YQ9BZA8 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDH11YQ9BZA8 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDH11YQ9BZA8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC25.55■■□□□ 1.68
PCDH11YQ9BZA8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDH11YQ9BZA8 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDH11YQ9BZA8 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDH11YQ9BZA8 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
PCDH11YQ9BZA8 AC092647.4-201ENST00000457211 535 ntBASIC25.55■■□□□ 1.68
PCDH11YQ9BZA8 NMU-205ENST00000511469 756 ntTSL 3 BASIC25.55■■□□□ 1.68
PCDH11YQ9BZA8 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC25.55■■□□□ 1.68
PCDH11YQ9BZA8 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC25.55■■□□□ 1.68
PCDH11YQ9BZA8 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDH11YQ9BZA8 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDH11YQ9BZA8 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
PCDH11YQ9BZA8 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC25.55■■□□□ 1.68
PCDH11YQ9BZA8 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDH11YQ9BZA8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDH11YQ9BZA8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC25.54■■□□□ 1.68
PCDH11YQ9BZA8 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDH11YQ9BZA8 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDH11YQ9BZA8 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC25.54■■□□□ 1.68
PCDH11YQ9BZA8 AC026310.3-201ENST00000625186 2373 ntBASIC25.54■■□□□ 1.68
PCDH11YQ9BZA8 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
PCDH11YQ9BZA8 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC25.54■■□□□ 1.68
PCDH11YQ9BZA8 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC25.54■■□□□ 1.68
PCDH11YQ9BZA8 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC25.54■■□□□ 1.68
PCDH11YQ9BZA8 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PCDH11YQ9BZA8 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDH11YQ9BZA8 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC25.54■■□□□ 1.68
PCDH11YQ9BZA8 ANKRD20A18P-201ENST00000359341 492 ntBASIC25.53■■□□□ 1.68
PCDH11YQ9BZA8 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC25.53■■□□□ 1.68
PCDH11YQ9BZA8 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDH11YQ9BZA8 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PCDH11YQ9BZA8 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC25.53■■□□□ 1.68
PCDH11YQ9BZA8 NME1-207ENST00000480143 964 ntTSL 2 BASIC25.53■■□□□ 1.68
PCDH11YQ9BZA8 AL353719.1-201ENST00000566847 864 ntBASIC25.53■■□□□ 1.68
PCDH11YQ9BZA8 METTL23-204ENST00000586752 904 ntTSL 2 BASIC25.53■■□□□ 1.68
PCDH11YQ9BZA8 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC25.53■■□□□ 1.68
PCDH11YQ9BZA8 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDH11YQ9BZA8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC25.53■■□□□ 1.68
PCDH11YQ9BZA8 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDH11YQ9BZA8 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDH11YQ9BZA8 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC25.52■■□□□ 1.68
PCDH11YQ9BZA8 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDH11YQ9BZA8 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDH11YQ9BZA8 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC25.52■■□□□ 1.68
PCDH11YQ9BZA8 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC25.52■■□□□ 1.68
PCDH11YQ9BZA8 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC25.52■■□□□ 1.68
PCDH11YQ9BZA8 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC25.52■■□□□ 1.68
PCDH11YQ9BZA8 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PCDH11YQ9BZA8 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PCDH11YQ9BZA8 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PCDH11YQ9BZA8 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
PCDH11YQ9BZA8 AL160286.2-201ENST00000567150 934 ntBASIC25.52■■□□□ 1.68
PCDH11YQ9BZA8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC25.52■■□□□ 1.68
PCDH11YQ9BZA8 DBP-204ENST00000599385 709 ntTSL 3 BASIC25.52■■□□□ 1.68
PCDH11YQ9BZA8 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
PCDH11YQ9BZA8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC25.51■■□□□ 1.67
PCDH11YQ9BZA8 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDH11YQ9BZA8 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC25.51■■□□□ 1.67
PCDH11YQ9BZA8 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC25.51■■□□□ 1.67
PCDH11YQ9BZA8 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PCDH11YQ9BZA8 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDH11YQ9BZA8 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDH11YQ9BZA8 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC25.51■■□□□ 1.67
PCDH11YQ9BZA8 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDH11YQ9BZA8 CA15P1-201ENST00000481698 905 ntBASIC25.51■■□□□ 1.67
PCDH11YQ9BZA8 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC25.51■■□□□ 1.67
PCDH11YQ9BZA8 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
PCDH11YQ9BZA8 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC25.51■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms