Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 NXT2-204ENST00000372107 937 ntTSL 3 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 OR13C3-201ENST00000374781 1108 ntBASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 RNU6-1011P-201ENST00000384668 107 ntBASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AL121978.1-201ENST00000402778 359 ntBASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 RAD23BP2-201ENST00000416003 1207 ntBASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 LHFPL3-AS1-202ENST00000416376 866 ntTSL 3 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AC006366.1-201ENST00000422002 759 ntBASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 C2orf74-203ENST00000432605 887 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AC079988.1-201ENST00000432984 544 ntTSL 4 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AL139220.1-201ENST00000436802 520 ntBASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 MIR4435-2HG-211ENST00000443467 826 ntTSL 3 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AC114755.5-201ENST00000447760 831 ntBASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 PBX2P1-201ENST00000493219 1291 ntBASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AC092807.3-202ENST00000498304 508 ntTSL 3 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AC117522.1-201ENST00000509821 380 ntBASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AC116345.1-202ENST00000513379 941 ntTSL 5 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 RDH10-203ENST00000519380 978 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 OR4A46P-201ENST00000527255 933 ntBASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AC131934.1-201ENST00000527799 912 ntTSL 5 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AP003063.1-201ENST00000528496 855 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 PDCD5P1-201ENST00000543528 309 ntBASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AC084879.1-203ENST00000550470 1257 ntTSL 5 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 SERPINE4P-201ENST00000554978 281 ntBASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 LINC01579-206ENST00000556928 657 ntTSL 3 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AC010542.2-201ENST00000568560 511 ntTSL 5 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 MTATP6P25-201ENST00000574491 261 ntBASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 STARD6-202ENST00000577499 696 ntTSL 2 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AC025682.1-204ENST00000580045 733 ntTSL 5 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 MTATP6P3-201ENST00000581686 676 ntBASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AP005482.3-201ENST00000585877 720 ntBASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AL356740.2-201ENST00000601559 647 ntBASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 DEFB131E-202ENST00000602581 683 ntBASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AC018638.6-201ENST00000605007 1267 ntBASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 FGF14-AS2-201ENST00000606448 1074 ntBASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 MIR6724-1-201ENST00000616420 92 ntBASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 MIR6724-2-201ENST00000616483 92 ntBASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 MIR6724-4-201ENST00000617390 92 ntBASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AC006449.2-201ENST00000618407 486 ntTSL 2 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AL121890.3-201ENST00000618494 516 ntBASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 MIR6724-3-201ENST00000622482 92 ntBASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AC015871.5-202ENST00000623252 701 ntBASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 AC138305.3-201ENST00000624988 240 ntBASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC4.13□□□□□ -1.75
KRTAP4-4Q9BYR3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms