Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDCA3Q99618 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.51■□□□□ 0.87
CDCA3Q99618 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDCA3Q99618 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDCA3Q99618 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.51■□□□□ 0.87
CDCA3Q99618 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDCA3Q99618 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDCA3Q99618 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDCA3Q99618 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.51■□□□□ 0.87
CDCA3Q99618 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDCA3Q99618 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.51■□□□□ 0.87
CDCA3Q99618 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDCA3Q99618 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.51■□□□□ 0.87
CDCA3Q99618 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.51■□□□□ 0.87
CDCA3Q99618 AL160286.2-201ENST00000567150 934 ntBASIC20.51■□□□□ 0.87
CDCA3Q99618 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.51■□□□□ 0.87
CDCA3Q99618 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDCA3Q99618 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDCA3Q99618 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDCA3Q99618 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDCA3Q99618 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDCA3Q99618 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDCA3Q99618 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDCA3Q99618 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDCA3Q99618 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDCA3Q99618 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CDCA3Q99618 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDCA3Q99618 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDCA3Q99618 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CDCA3Q99618 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDCA3Q99618 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.5■□□□□ 0.87
CDCA3Q99618 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.5■□□□□ 0.87
CDCA3Q99618 PRSS44-201ENST00000515154 1146 ntBASIC20.5■□□□□ 0.87
CDCA3Q99618 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.5■□□□□ 0.87
CDCA3Q99618 AC069148.1-201ENST00000608741 768 ntBASIC20.5■□□□□ 0.87
CDCA3Q99618 AL023973.1-201ENST00000624619 620 ntBASIC20.5■□□□□ 0.87
CDCA3Q99618 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.5■□□□□ 0.87
CDCA3Q99618 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.5■□□□□ 0.87
CDCA3Q99618 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.5■□□□□ 0.87
CDCA3Q99618 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CDCA3Q99618 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.49■□□□□ 0.87
CDCA3Q99618 FEM1AP4-201ENST00000443167 1987 ntBASIC20.49■□□□□ 0.87
CDCA3Q99618 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.49■□□□□ 0.87
CDCA3Q99618 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDCA3Q99618 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDCA3Q99618 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.49■□□□□ 0.87
CDCA3Q99618 HCG4P8-203ENST00000443049 980 ntBASIC20.49■□□□□ 0.87
CDCA3Q99618 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.49■□□□□ 0.87
CDCA3Q99618 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.49■□□□□ 0.87
CDCA3Q99618 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.49■□□□□ 0.87
CDCA3Q99618 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.49■□□□□ 0.87
CDCA3Q99618 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.49■□□□□ 0.87
CDCA3Q99618 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.49■□□□□ 0.87
CDCA3Q99618 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.49■□□□□ 0.87
CDCA3Q99618 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDCA3Q99618 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDCA3Q99618 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDCA3Q99618 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDCA3Q99618 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDCA3Q99618 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDCA3Q99618 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDCA3Q99618 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.49■□□□□ 0.87
CDCA3Q99618 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDCA3Q99618 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.48■□□□□ 0.87
CDCA3Q99618 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA3Q99618 AC006128.1-201ENST00000624704 1661 ntBASIC20.48■□□□□ 0.87
CDCA3Q99618 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA3Q99618 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA3Q99618 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA3Q99618 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CDCA3Q99618 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA3Q99618 AC026396.1-201ENST00000419388 421 ntBASIC20.48■□□□□ 0.87
CDCA3Q99618 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.48■□□□□ 0.87
CDCA3Q99618 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.48■□□□□ 0.87
CDCA3Q99618 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA3Q99618 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.48■□□□□ 0.87
CDCA3Q99618 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA3Q99618 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.48■□□□□ 0.87
CDCA3Q99618 AL136038.3-201ENST00000561909 1096 ntBASIC20.48■□□□□ 0.87
CDCA3Q99618 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
CDCA3Q99618 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA3Q99618 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA3Q99618 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA3Q99618 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.48■□□□□ 0.87
CDCA3Q99618 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.48■□□□□ 0.87
CDCA3Q99618 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA3Q99618 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDCA3Q99618 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDCA3Q99618 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDCA3Q99618 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDCA3Q99618 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.47■□□□□ 0.87
CDCA3Q99618 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDCA3Q99618 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDCA3Q99618 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDCA3Q99618 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.47■□□□□ 0.87
CDCA3Q99618 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.47■□□□□ 0.87
CDCA3Q99618 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.47■□□□□ 0.87
CDCA3Q99618 CKBP1-201ENST00000565489 1086 ntBASIC20.47■□□□□ 0.87
CDCA3Q99618 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.47■□□□□ 0.87
CDCA3Q99618 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms