Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
S1PR3Q99500 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
S1PR3Q99500 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
S1PR3Q99500 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC16.18■□□□□ 0.18
S1PR3Q99500 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
S1PR3Q99500 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
S1PR3Q99500 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
S1PR3Q99500 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
S1PR3Q99500 AL390719.1-204ENST00000412397 1219 ntBASIC16.18■□□□□ 0.18
S1PR3Q99500 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.18■□□□□ 0.18
S1PR3Q99500 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.18■□□□□ 0.18
S1PR3Q99500 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.18■□□□□ 0.18
S1PR3Q99500 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.18■□□□□ 0.18
S1PR3Q99500 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
S1PR3Q99500 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
S1PR3Q99500 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
S1PR3Q99500 MIR4758-201ENST00000577688 71 ntBASIC16.18■□□□□ 0.18
S1PR3Q99500 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.18■□□□□ 0.18
S1PR3Q99500 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.18■□□□□ 0.18
S1PR3Q99500 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.18■□□□□ 0.18
S1PR3Q99500 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
S1PR3Q99500 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.18■□□□□ 0.18
S1PR3Q99500 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
S1PR3Q99500 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
S1PR3Q99500 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
S1PR3Q99500 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
S1PR3Q99500 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
S1PR3Q99500 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
S1PR3Q99500 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
S1PR3Q99500 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
S1PR3Q99500 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
S1PR3Q99500 PHGDH-210ENST00000641115 1638 ntBASIC16.17■□□□□ 0.18
S1PR3Q99500 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
S1PR3Q99500 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
S1PR3Q99500 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.17■□□□□ 0.18
S1PR3Q99500 AC092118.2-201ENST00000613495 667 ntBASIC16.17■□□□□ 0.18
S1PR3Q99500 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.17■□□□□ 0.18
S1PR3Q99500 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.17■□□□□ 0.18
S1PR3Q99500 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.17■□□□□ 0.18
S1PR3Q99500 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
S1PR3Q99500 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
S1PR3Q99500 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
S1PR3Q99500 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
S1PR3Q99500 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
S1PR3Q99500 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
S1PR3Q99500 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
S1PR3Q99500 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
S1PR3Q99500 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
S1PR3Q99500 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.16■□□□□ 0.18
S1PR3Q99500 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.16■□□□□ 0.18
S1PR3Q99500 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
S1PR3Q99500 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
S1PR3Q99500 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
S1PR3Q99500 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
S1PR3Q99500 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
S1PR3Q99500 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
S1PR3Q99500 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
S1PR3Q99500 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
S1PR3Q99500 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
S1PR3Q99500 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
S1PR3Q99500 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
S1PR3Q99500 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.16■□□□□ 0.18
S1PR3Q99500 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
S1PR3Q99500 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.16■□□□□ 0.18
S1PR3Q99500 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
S1PR3Q99500 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.16■□□□□ 0.18
S1PR3Q99500 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
S1PR3Q99500 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
S1PR3Q99500 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.16■□□□□ 0.18
S1PR3Q99500 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
S1PR3Q99500 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
S1PR3Q99500 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
S1PR3Q99500 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
S1PR3Q99500 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.15■□□□□ 0.18
S1PR3Q99500 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
S1PR3Q99500 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
S1PR3Q99500 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.15■□□□□ 0.18
S1PR3Q99500 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.15■□□□□ 0.18
S1PR3Q99500 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
S1PR3Q99500 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.15■□□□□ 0.18
S1PR3Q99500 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
S1PR3Q99500 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
S1PR3Q99500 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
S1PR3Q99500 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
S1PR3Q99500 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
S1PR3Q99500 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.15■□□□□ 0.18
S1PR3Q99500 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.15■□□□□ 0.18
S1PR3Q99500 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
S1PR3Q99500 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
S1PR3Q99500 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
S1PR3Q99500 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.15■□□□□ 0.18
S1PR3Q99500 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.15■□□□□ 0.18
S1PR3Q99500 AL138781.1-201ENST00000566567 1274 ntBASIC16.15■□□□□ 0.18
S1PR3Q99500 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.15■□□□□ 0.18
S1PR3Q99500 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.15■□□□□ 0.18
S1PR3Q99500 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
S1PR3Q99500 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.15■□□□□ 0.18
S1PR3Q99500 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
S1PR3Q99500 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
S1PR3Q99500 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms