Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RPGRIP1Q96KN7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RPGRIP1Q96KN7 AP001412.1-201ENST00000608405 714 ntBASIC21.6■■□□□ 1.05
RPGRIP1Q96KN7 AL023875.1-201ENST00000640777 796 ntBASIC21.6■■□□□ 1.05
RPGRIP1Q96KN7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RPGRIP1Q96KN7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPGRIP1Q96KN7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RPGRIP1Q96KN7 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPGRIP1Q96KN7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
RPGRIP1Q96KN7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RPGRIP1Q96KN7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RPGRIP1Q96KN7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.59■■□□□ 1.05
RPGRIP1Q96KN7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RPGRIP1Q96KN7 RCN1P1-201ENST00000400413 996 ntBASIC21.59■■□□□ 1.05
RPGRIP1Q96KN7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.59■■□□□ 1.05
RPGRIP1Q96KN7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.59■■□□□ 1.05
RPGRIP1Q96KN7 MIR4785-201ENST00000585005 73 ntBASIC21.59■■□□□ 1.05
RPGRIP1Q96KN7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RPGRIP1Q96KN7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RPGRIP1Q96KN7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.59■■□□□ 1.05
RPGRIP1Q96KN7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RPGRIP1Q96KN7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.59■■□□□ 1.05
RPGRIP1Q96KN7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.59■■□□□ 1.05
RPGRIP1Q96KN7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
RPGRIP1Q96KN7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
RPGRIP1Q96KN7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RPGRIP1Q96KN7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
RPGRIP1Q96KN7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.58■■□□□ 1.05
RPGRIP1Q96KN7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.58■■□□□ 1.05
RPGRIP1Q96KN7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RPGRIP1Q96KN7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RPGRIP1Q96KN7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RPGRIP1Q96KN7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.58■■□□□ 1.05
RPGRIP1Q96KN7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.58■■□□□ 1.05
RPGRIP1Q96KN7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
RPGRIP1Q96KN7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.58■■□□□ 1.05
RPGRIP1Q96KN7 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.58■■□□□ 1.05
RPGRIP1Q96KN7 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
RPGRIP1Q96KN7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.58■■□□□ 1.05
RPGRIP1Q96KN7 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
RPGRIP1Q96KN7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RPGRIP1Q96KN7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.58■■□□□ 1.05
RPGRIP1Q96KN7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RPGRIP1Q96KN7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RPGRIP1Q96KN7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
RPGRIP1Q96KN7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.58■■□□□ 1.04
RPGRIP1Q96KN7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RPGRIP1Q96KN7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
RPGRIP1Q96KN7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPGRIP1Q96KN7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
RPGRIP1Q96KN7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RPGRIP1Q96KN7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.57■■□□□ 1.04
RPGRIP1Q96KN7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
RPGRIP1Q96KN7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPGRIP1Q96KN7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPGRIP1Q96KN7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPGRIP1Q96KN7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
RPGRIP1Q96KN7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RPGRIP1Q96KN7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.57■■□□□ 1.04
RPGRIP1Q96KN7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.57■■□□□ 1.04
RPGRIP1Q96KN7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RPGRIP1Q96KN7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPGRIP1Q96KN7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.57■■□□□ 1.04
RPGRIP1Q96KN7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RPGRIP1Q96KN7 AL445228.2-201ENST00000605589 952 ntBASIC21.57■■□□□ 1.04
RPGRIP1Q96KN7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.57■■□□□ 1.04
RPGRIP1Q96KN7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPGRIP1Q96KN7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.57■■□□□ 1.04
RPGRIP1Q96KN7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPGRIP1Q96KN7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.56■■□□□ 1.04
RPGRIP1Q96KN7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RPGRIP1Q96KN7 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
RPGRIP1Q96KN7 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPGRIP1Q96KN7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RPGRIP1Q96KN7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.56■■□□□ 1.04
RPGRIP1Q96KN7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
RPGRIP1Q96KN7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPGRIP1Q96KN7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
RPGRIP1Q96KN7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPGRIP1Q96KN7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.56■■□□□ 1.04
RPGRIP1Q96KN7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPGRIP1Q96KN7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RPGRIP1Q96KN7 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.56■■□□□ 1.04
RPGRIP1Q96KN7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.56■■□□□ 1.04
RPGRIP1Q96KN7 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.56■■□□□ 1.04
RPGRIP1Q96KN7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.56■■□□□ 1.04
RPGRIP1Q96KN7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.56■■□□□ 1.04
RPGRIP1Q96KN7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPGRIP1Q96KN7 MTDHP1-201ENST00000605323 784 ntBASIC21.56■■□□□ 1.04
RPGRIP1Q96KN7 AC124016.1-201ENST00000609552 612 ntBASIC21.56■■□□□ 1.04
RPGRIP1Q96KN7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.56■■□□□ 1.04
RPGRIP1Q96KN7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
RPGRIP1Q96KN7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPGRIP1Q96KN7 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPGRIP1Q96KN7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.55■■□□□ 1.04
RPGRIP1Q96KN7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
RPGRIP1Q96KN7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RPGRIP1Q96KN7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPGRIP1Q96KN7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RPGRIP1Q96KN7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms