Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.08■■□□□ 1.29
CDCA5Q96FF9 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CDCA5Q96FF9 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CDCA5Q96FF9 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CDCA5Q96FF9 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
CDCA5Q96FF9 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CDCA5Q96FF9 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CDCA5Q96FF9 CA15P1-201ENST00000481698 905 ntBASIC23.08■■□□□ 1.29
CDCA5Q96FF9 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC23.08■■□□□ 1.29
CDCA5Q96FF9 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC23.08■■□□□ 1.29
CDCA5Q96FF9 IRF5-214ENST00000613821 595 ntTSL 5 BASIC23.08■■□□□ 1.29
CDCA5Q96FF9 AC083849.1-201ENST00000615227 514 ntBASIC23.08■■□□□ 1.29
CDCA5Q96FF9 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CDCA5Q96FF9 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CDCA5Q96FF9 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CDCA5Q96FF9 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
CDCA5Q96FF9 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CDCA5Q96FF9 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDCA5Q96FF9 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDCA5Q96FF9 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC23.07■■□□□ 1.28
CDCA5Q96FF9 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDCA5Q96FF9 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDCA5Q96FF9 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
CDCA5Q96FF9 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CDCA5Q96FF9 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDCA5Q96FF9 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC23.07■■□□□ 1.28
CDCA5Q96FF9 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDCA5Q96FF9 AC112907.2-201ENST00000448639 330 ntBASIC23.07■■□□□ 1.28
CDCA5Q96FF9 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC23.07■■□□□ 1.28
CDCA5Q96FF9 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC23.07■■□□□ 1.28
CDCA5Q96FF9 AP003041.3-201ENST00000527151 707 ntBASIC23.07■■□□□ 1.28
CDCA5Q96FF9 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDCA5Q96FF9 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CDCA5Q96FF9 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC23.07■■□□□ 1.28
CDCA5Q96FF9 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDCA5Q96FF9 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDCA5Q96FF9 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDCA5Q96FF9 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDCA5Q96FF9 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDCA5Q96FF9 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
CDCA5Q96FF9 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC23.06■■□□□ 1.28
CDCA5Q96FF9 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDCA5Q96FF9 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDCA5Q96FF9 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDCA5Q96FF9 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
CDCA5Q96FF9 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC23.06■■□□□ 1.28
CDCA5Q96FF9 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC23.06■■□□□ 1.28
CDCA5Q96FF9 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC23.06■■□□□ 1.28
CDCA5Q96FF9 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC23.06■■□□□ 1.28
CDCA5Q96FF9 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC23.06■■□□□ 1.28
CDCA5Q96FF9 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDCA5Q96FF9 KRT8P45-201ENST00000414328 1447 ntBASIC23.06■■□□□ 1.28
CDCA5Q96FF9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC23.06■■□□□ 1.28
CDCA5Q96FF9 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.05■■□□□ 1.28
CDCA5Q96FF9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CDCA5Q96FF9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDCA5Q96FF9 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.05■■□□□ 1.28
CDCA5Q96FF9 FP700111.2-201ENST00000619190 1892 ntBASIC23.05■■□□□ 1.28
CDCA5Q96FF9 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.05■■□□□ 1.28
CDCA5Q96FF9 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDCA5Q96FF9 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDCA5Q96FF9 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDCA5Q96FF9 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC23.05■■□□□ 1.28
CDCA5Q96FF9 ZNF444P1-201ENST00000559497 298 ntBASIC23.05■■□□□ 1.28
CDCA5Q96FF9 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC23.05■■□□□ 1.28
CDCA5Q96FF9 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CDCA5Q96FF9 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC23.05■■□□□ 1.28
CDCA5Q96FF9 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CDCA5Q96FF9 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDCA5Q96FF9 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDCA5Q96FF9 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC23.05■■□□□ 1.28
CDCA5Q96FF9 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC23.05■■□□□ 1.28
CDCA5Q96FF9 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CDCA5Q96FF9 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CDCA5Q96FF9 TMEM179-206ENST00000616017 1645 ntBASIC23.04■■□□□ 1.28
CDCA5Q96FF9 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
CDCA5Q96FF9 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDCA5Q96FF9 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDCA5Q96FF9 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDCA5Q96FF9 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC23.04■■□□□ 1.28
CDCA5Q96FF9 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC23.04■■□□□ 1.28
CDCA5Q96FF9 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CDCA5Q96FF9 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CDCA5Q96FF9 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC23.04■■□□□ 1.28
CDCA5Q96FF9 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
CDCA5Q96FF9 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC23.03■■□□□ 1.28
CDCA5Q96FF9 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC23.03■■□□□ 1.28
CDCA5Q96FF9 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC23.03■■□□□ 1.28
CDCA5Q96FF9 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CDCA5Q96FF9 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
CDCA5Q96FF9 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC23.03■■□□□ 1.28
CDCA5Q96FF9 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CDCA5Q96FF9 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
CDCA5Q96FF9 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDCA5Q96FF9 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDCA5Q96FF9 Telomerase-vert.1-201ENST00000363312 438 ntBASIC23.03■■□□□ 1.28
CDCA5Q96FF9 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC23.03■■□□□ 1.28
CDCA5Q96FF9 ATP5G2P1-201ENST00000433580 426 ntBASIC23.03■■□□□ 1.28
CDCA5Q96FF9 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC23.03■■□□□ 1.28
CDCA5Q96FF9 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms