Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.65■□□□□ 0.58
LRRC58Q96CX6 MFSD11-216ENST00000590393 1141 ntBASIC18.65■□□□□ 0.58
LRRC58Q96CX6 AC105020.6-201ENST00000621523 1217 ntBASIC18.65■□□□□ 0.58
LRRC58Q96CX6 AC013268.1-206ENST00000638368 961 ntBASIC18.65■□□□□ 0.58
LRRC58Q96CX6 AC112229.1-201ENST00000639295 961 ntBASIC18.65■□□□□ 0.58
LRRC58Q96CX6 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC58Q96CX6 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LRRC58Q96CX6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LRRC58Q96CX6 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC58Q96CX6 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LRRC58Q96CX6 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
LRRC58Q96CX6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC58Q96CX6 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC58Q96CX6 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC58Q96CX6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC58Q96CX6 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.65■□□□□ 0.58
LRRC58Q96CX6 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC58Q96CX6 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC58Q96CX6 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.64■□□□□ 0.58
LRRC58Q96CX6 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.58
LRRC58Q96CX6 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC58Q96CX6 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.64■□□□□ 0.57
LRRC58Q96CX6 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC58Q96CX6 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.64■□□□□ 0.57
LRRC58Q96CX6 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.64■□□□□ 0.57
LRRC58Q96CX6 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
LRRC58Q96CX6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC58Q96CX6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC58Q96CX6 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC58Q96CX6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.64■□□□□ 0.57
LRRC58Q96CX6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC58Q96CX6 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC58Q96CX6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
LRRC58Q96CX6 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC58Q96CX6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC58Q96CX6 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC58Q96CX6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.64■□□□□ 0.57
LRRC58Q96CX6 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC58Q96CX6 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC58Q96CX6 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC58Q96CX6 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC58Q96CX6 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC58Q96CX6 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC58Q96CX6 AL161938.1-201ENST00000569833 2180 ntBASIC18.64■□□□□ 0.57
LRRC58Q96CX6 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC58Q96CX6 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LRRC58Q96CX6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC58Q96CX6 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC58Q96CX6 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC58Q96CX6 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC58Q96CX6 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC58Q96CX6 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LRRC58Q96CX6 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.63■□□□□ 0.57
LRRC58Q96CX6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.63■□□□□ 0.57
LRRC58Q96CX6 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC58Q96CX6 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC58Q96CX6 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.63■□□□□ 0.57
LRRC58Q96CX6 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC58Q96CX6 RARRES2P4-201ENST00000514074 484 ntBASIC18.63■□□□□ 0.57
LRRC58Q96CX6 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.63■□□□□ 0.57
LRRC58Q96CX6 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LRRC58Q96CX6 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.63■□□□□ 0.57
LRRC58Q96CX6 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
LRRC58Q96CX6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
LRRC58Q96CX6 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.63■□□□□ 0.57
LRRC58Q96CX6 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LRRC58Q96CX6 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.63■□□□□ 0.57
LRRC58Q96CX6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
LRRC58Q96CX6 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC58Q96CX6 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC58Q96CX6 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.63■□□□□ 0.57
LRRC58Q96CX6 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC58Q96CX6 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.63■□□□□ 0.57
LRRC58Q96CX6 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC58Q96CX6 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC58Q96CX6 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRC58Q96CX6 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC58Q96CX6 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC58Q96CX6 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
LRRC58Q96CX6 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LRRC58Q96CX6 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC58Q96CX6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC58Q96CX6 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.62■□□□□ 0.57
LRRC58Q96CX6 KRT18P68-201ENST00000392293 1000 ntBASIC18.62■□□□□ 0.57
LRRC58Q96CX6 ZNRF2P3-201ENST00000424200 374 ntBASIC18.62■□□□□ 0.57
LRRC58Q96CX6 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.62■□□□□ 0.57
LRRC58Q96CX6 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRC58Q96CX6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
LRRC58Q96CX6 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC58Q96CX6 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC58Q96CX6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC58Q96CX6 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRC58Q96CX6 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC58Q96CX6 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC58Q96CX6 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC58Q96CX6 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC58Q96CX6 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
LRRC58Q96CX6 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC58Q96CX6 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
LRRC58Q96CX6 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms