Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM43Q96BQ3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM43Q96BQ3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
TRIM43Q96BQ3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.41■■□□□ 1.02
TRIM43Q96BQ3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM43Q96BQ3 AP003041.3-201ENST00000527151 707 ntBASIC21.41■■□□□ 1.02
TRIM43Q96BQ3 ZNF444P1-201ENST00000559497 298 ntBASIC21.41■■□□□ 1.02
TRIM43Q96BQ3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.41■■□□□ 1.02
TRIM43Q96BQ3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.41■■□□□ 1.02
TRIM43Q96BQ3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM43Q96BQ3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
TRIM43Q96BQ3 AC233723.2-201ENST00000623798 2106 ntBASIC21.41■■□□□ 1.02
TRIM43Q96BQ3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.41■■□□□ 1.02
TRIM43Q96BQ3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM43Q96BQ3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM43Q96BQ3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
TRIM43Q96BQ3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.4■■□□□ 1.02
TRIM43Q96BQ3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM43Q96BQ3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM43Q96BQ3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
TRIM43Q96BQ3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM43Q96BQ3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM43Q96BQ3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM43Q96BQ3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.4■■□□□ 1.02
TRIM43Q96BQ3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.4■■□□□ 1.02
TRIM43Q96BQ3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.4■■□□□ 1.02
TRIM43Q96BQ3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.4■■□□□ 1.02
TRIM43Q96BQ3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.4■■□□□ 1.02
TRIM43Q96BQ3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
TRIM43Q96BQ3 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM43Q96BQ3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM43Q96BQ3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM43Q96BQ3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
TRIM43Q96BQ3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.4■■□□□ 1.02
TRIM43Q96BQ3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM43Q96BQ3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.39■■□□□ 1.01
TRIM43Q96BQ3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.39■■□□□ 1.01
TRIM43Q96BQ3 AP000347.1-202ENST00000435868 847 ntBASIC21.39■■□□□ 1.01
TRIM43Q96BQ3 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC21.39■■□□□ 1.01
TRIM43Q96BQ3 CA15P1-201ENST00000481698 905 ntBASIC21.39■■□□□ 1.01
TRIM43Q96BQ3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.39■■□□□ 1.01
TRIM43Q96BQ3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC21.39■■□□□ 1.01
TRIM43Q96BQ3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM43Q96BQ3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.39■■□□□ 1.01
TRIM43Q96BQ3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.38■■□□□ 1.01
TRIM43Q96BQ3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM43Q96BQ3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM43Q96BQ3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM43Q96BQ3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
TRIM43Q96BQ3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.38■■□□□ 1.01
TRIM43Q96BQ3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.38■■□□□ 1.01
TRIM43Q96BQ3 PVRIG2P-201ENST00000435460 978 ntBASIC21.38■■□□□ 1.01
TRIM43Q96BQ3 FDX1P1-201ENST00000449115 551 ntBASIC21.38■■□□□ 1.01
TRIM43Q96BQ3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.38■■□□□ 1.01
TRIM43Q96BQ3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.38■■□□□ 1.01
TRIM43Q96BQ3 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.38■■□□□ 1.01
TRIM43Q96BQ3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
TRIM43Q96BQ3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.38■■□□□ 1.01
TRIM43Q96BQ3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.38■■□□□ 1.01
TRIM43Q96BQ3 ECEL1P1-201ENST00000373592 1742 ntBASIC21.38■■□□□ 1.01
TRIM43Q96BQ3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM43Q96BQ3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM43Q96BQ3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM43Q96BQ3 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM43Q96BQ3 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM43Q96BQ3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.37■■□□□ 1.01
TRIM43Q96BQ3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC21.37■■□□□ 1.01
TRIM43Q96BQ3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.37■■□□□ 1.01
TRIM43Q96BQ3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.37■■□□□ 1.01
TRIM43Q96BQ3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM43Q96BQ3 PHGDH-210ENST00000641115 1638 ntBASIC21.37■■□□□ 1.01
TRIM43Q96BQ3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
TRIM43Q96BQ3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.36■■□□□ 1.01
TRIM43Q96BQ3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM43Q96BQ3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM43Q96BQ3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM43Q96BQ3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM43Q96BQ3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM43Q96BQ3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM43Q96BQ3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM43Q96BQ3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.36■■□□□ 1.01
TRIM43Q96BQ3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.36■■□□□ 1.01
TRIM43Q96BQ3 RN7SL510P-201ENST00000581311 263 ntBASIC21.36■■□□□ 1.01
TRIM43Q96BQ3 NPAP1P7-201ENST00000613027 823 ntBASIC21.36■■□□□ 1.01
TRIM43Q96BQ3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM43Q96BQ3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM43Q96BQ3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM43Q96BQ3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
TRIM43Q96BQ3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM43Q96BQ3 PLK5-205ENST00000642079 1969 ntBASIC21.36■■□□□ 1.01
TRIM43Q96BQ3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.36■■□□□ 1.01
TRIM43Q96BQ3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM43Q96BQ3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.35■■□□□ 1.01
TRIM43Q96BQ3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.35■■□□□ 1.01
TRIM43Q96BQ3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM43Q96BQ3 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM43Q96BQ3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.35■■□□□ 1.01
TRIM43Q96BQ3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.35■■□□□ 1.01
TRIM43Q96BQ3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM43Q96BQ3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms