Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.88■□□□□ 0.61
UBE2E3Q969T4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBE2E3Q969T4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBE2E3Q969T4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.88■□□□□ 0.61
UBE2E3Q969T4 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBE2E3Q969T4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBE2E3Q969T4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBE2E3Q969T4 UNC93B4-201ENST00000505679 747 ntBASIC18.88■□□□□ 0.61
UBE2E3Q969T4 AL121829.2-201ENST00000620908 328 ntBASIC18.88■□□□□ 0.61
UBE2E3Q969T4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
UBE2E3Q969T4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBE2E3Q969T4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.88■□□□□ 0.61
UBE2E3Q969T4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.88■□□□□ 0.61
UBE2E3Q969T4 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBE2E3Q969T4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBE2E3Q969T4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
UBE2E3Q969T4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBE2E3Q969T4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBE2E3Q969T4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
UBE2E3Q969T4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.87■□□□□ 0.61
UBE2E3Q969T4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.87■□□□□ 0.61
UBE2E3Q969T4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.87■□□□□ 0.61
UBE2E3Q969T4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
UBE2E3Q969T4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
UBE2E3Q969T4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.87■□□□□ 0.61
UBE2E3Q969T4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.87■□□□□ 0.61
UBE2E3Q969T4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.87■□□□□ 0.61
UBE2E3Q969T4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.87■□□□□ 0.61
UBE2E3Q969T4 UNC93B5-201ENST00000530315 699 ntBASIC18.87■□□□□ 0.61
UBE2E3Q969T4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
UBE2E3Q969T4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.87■□□□□ 0.61
UBE2E3Q969T4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBE2E3Q969T4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBE2E3Q969T4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.87■□□□□ 0.61
UBE2E3Q969T4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBE2E3Q969T4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBE2E3Q969T4 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UBE2E3Q969T4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBE2E3Q969T4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
UBE2E3Q969T4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UBE2E3Q969T4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBE2E3Q969T4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.86■□□□□ 0.61
UBE2E3Q969T4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.86■□□□□ 0.61
UBE2E3Q969T4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
UBE2E3Q969T4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
UBE2E3Q969T4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBE2E3Q969T4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.86■□□□□ 0.61
UBE2E3Q969T4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
UBE2E3Q969T4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
UBE2E3Q969T4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
UBE2E3Q969T4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
UBE2E3Q969T4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.86■□□□□ 0.61
UBE2E3Q969T4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBE2E3Q969T4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.86■□□□□ 0.61
UBE2E3Q969T4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBE2E3Q969T4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
UBE2E3Q969T4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.86■□□□□ 0.61
UBE2E3Q969T4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.86■□□□□ 0.61
UBE2E3Q969T4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBE2E3Q969T4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
UBE2E3Q969T4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBE2E3Q969T4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBE2E3Q969T4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.86■□□□□ 0.61
UBE2E3Q969T4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
UBE2E3Q969T4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
UBE2E3Q969T4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
UBE2E3Q969T4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.86■□□□□ 0.61
UBE2E3Q969T4 AC124283.5-201ENST00000624661 1809 ntBASIC18.86■□□□□ 0.61
UBE2E3Q969T4 AL158211.5-201ENST00000623583 2518 ntBASIC18.85■□□□□ 0.61
UBE2E3Q969T4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.85■□□□□ 0.61
UBE2E3Q969T4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBE2E3Q969T4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBE2E3Q969T4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.85■□□□□ 0.61
UBE2E3Q969T4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
UBE2E3Q969T4 AP006587.1-201ENST00000534129 1502 ntBASIC18.85■□□□□ 0.61
UBE2E3Q969T4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBE2E3Q969T4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBE2E3Q969T4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
UBE2E3Q969T4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBE2E3Q969T4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBE2E3Q969T4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBE2E3Q969T4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBE2E3Q969T4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
UBE2E3Q969T4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
UBE2E3Q969T4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.85■□□□□ 0.61
UBE2E3Q969T4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.85■□□□□ 0.61
UBE2E3Q969T4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.85■□□□□ 0.61
UBE2E3Q969T4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
UBE2E3Q969T4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBE2E3Q969T4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBE2E3Q969T4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.85■□□□□ 0.61
UBE2E3Q969T4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBE2E3Q969T4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
UBE2E3Q969T4 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE2E3Q969T4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.84■□□□□ 0.61
UBE2E3Q969T4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE2E3Q969T4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
UBE2E3Q969T4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.84■□□□□ 0.61
UBE2E3Q969T4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.84■□□□□ 0.61
UBE2E3Q969T4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms