Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
SEMA4DQ92854 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SEMA4DQ92854 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SEMA4DQ92854 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SEMA4DQ92854 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SEMA4DQ92854 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.13■□□□□ 0.97
SEMA4DQ92854 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SEMA4DQ92854 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SEMA4DQ92854 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
SEMA4DQ92854 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SEMA4DQ92854 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.12■□□□□ 0.97
SEMA4DQ92854 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SEMA4DQ92854 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SEMA4DQ92854 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.12■□□□□ 0.97
SEMA4DQ92854 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SEMA4DQ92854 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SEMA4DQ92854 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SEMA4DQ92854 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SEMA4DQ92854 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
SEMA4DQ92854 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SEMA4DQ92854 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.12■□□□□ 0.97
SEMA4DQ92854 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.12■□□□□ 0.97
SEMA4DQ92854 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.12■□□□□ 0.97
SEMA4DQ92854 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.12■□□□□ 0.97
SEMA4DQ92854 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SEMA4DQ92854 AC006058.3-201ENST00000606217 1069 ntBASIC21.12■□□□□ 0.97
SEMA4DQ92854 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SEMA4DQ92854 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SEMA4DQ92854 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
SEMA4DQ92854 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
SEMA4DQ92854 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SEMA4DQ92854 AC116562.4-201ENST00000641316 2276 ntBASIC21.12■□□□□ 0.97
SEMA4DQ92854 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.12■□□□□ 0.97
SEMA4DQ92854 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.12■□□□□ 0.97
SEMA4DQ92854 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SEMA4DQ92854 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SEMA4DQ92854 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.11■□□□□ 0.97
SEMA4DQ92854 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.11■□□□□ 0.97
SEMA4DQ92854 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SEMA4DQ92854 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.11■□□□□ 0.97
SEMA4DQ92854 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SEMA4DQ92854 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.11■□□□□ 0.97
SEMA4DQ92854 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SEMA4DQ92854 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.11■□□□□ 0.97
SEMA4DQ92854 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.11■□□□□ 0.97
SEMA4DQ92854 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SEMA4DQ92854 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.11■□□□□ 0.97
SEMA4DQ92854 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.11■□□□□ 0.97
SEMA4DQ92854 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.11■□□□□ 0.97
SEMA4DQ92854 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.11■□□□□ 0.97
SEMA4DQ92854 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SEMA4DQ92854 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.11■□□□□ 0.97
SEMA4DQ92854 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SEMA4DQ92854 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.11■□□□□ 0.97
SEMA4DQ92854 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SEMA4DQ92854 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SEMA4DQ92854 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SEMA4DQ92854 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SEMA4DQ92854 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SEMA4DQ92854 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SEMA4DQ92854 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
SEMA4DQ92854 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SEMA4DQ92854 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SEMA4DQ92854 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.1■□□□□ 0.97
SEMA4DQ92854 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.1■□□□□ 0.97
SEMA4DQ92854 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SEMA4DQ92854 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
SEMA4DQ92854 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.1■□□□□ 0.97
SEMA4DQ92854 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SEMA4DQ92854 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SEMA4DQ92854 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SEMA4DQ92854 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SEMA4DQ92854 AC128676.1-201ENST00000454392 318 ntBASIC21.1■□□□□ 0.97
SEMA4DQ92854 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.1■□□□□ 0.97
SEMA4DQ92854 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.1■□□□□ 0.97
SEMA4DQ92854 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SEMA4DQ92854 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SEMA4DQ92854 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.1■□□□□ 0.97
SEMA4DQ92854 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SEMA4DQ92854 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SEMA4DQ92854 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SEMA4DQ92854 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SEMA4DQ92854 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.1■□□□□ 0.97
SEMA4DQ92854 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.09■□□□□ 0.97
SEMA4DQ92854 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SEMA4DQ92854 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
SEMA4DQ92854 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SEMA4DQ92854 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.09■□□□□ 0.97
SEMA4DQ92854 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.09■□□□□ 0.97
SEMA4DQ92854 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SEMA4DQ92854 AC093484.2-201ENST00000580996 2166 ntBASIC21.09■□□□□ 0.97
SEMA4DQ92854 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SEMA4DQ92854 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SEMA4DQ92854 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SEMA4DQ92854 AC007952.6-201ENST00000573168 2673 ntBASIC21.09■□□□□ 0.97
SEMA4DQ92854 AC003957.1-201ENST00000625108 2673 ntBASIC21.09■□□□□ 0.97
SEMA4DQ92854 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SEMA4DQ92854 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SEMA4DQ92854 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.09■□□□□ 0.97
SEMA4DQ92854 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms