Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
CHD5Q8TDI0 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.93■□□□□ 0.78
CHD5Q8TDI0 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHD5Q8TDI0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.93■□□□□ 0.78
CHD5Q8TDI0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHD5Q8TDI0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.93■□□□□ 0.78
CHD5Q8TDI0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.93■□□□□ 0.78
CHD5Q8TDI0 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.93■□□□□ 0.78
CHD5Q8TDI0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHD5Q8TDI0 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHD5Q8TDI0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHD5Q8TDI0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHD5Q8TDI0 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.93■□□□□ 0.78
CHD5Q8TDI0 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.93■□□□□ 0.78
CHD5Q8TDI0 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CHD5Q8TDI0 AC233702.5-201ENST00000584107 538 ntBASIC19.93■□□□□ 0.78
CHD5Q8TDI0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.93■□□□□ 0.78
CHD5Q8TDI0 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.93■□□□□ 0.78
CHD5Q8TDI0 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.93■□□□□ 0.78
CHD5Q8TDI0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHD5Q8TDI0 AL135905.2-201ENST00000584934 1404 ntBASIC19.93■□□□□ 0.78
CHD5Q8TDI0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.93■□□□□ 0.78
CHD5Q8TDI0 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.93■□□□□ 0.78
CHD5Q8TDI0 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
CHD5Q8TDI0 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.93■□□□□ 0.78
CHD5Q8TDI0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHD5Q8TDI0 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHD5Q8TDI0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHD5Q8TDI0 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.92■□□□□ 0.78
CHD5Q8TDI0 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHD5Q8TDI0 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.92■□□□□ 0.78
CHD5Q8TDI0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.92■□□□□ 0.78
CHD5Q8TDI0 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.92■□□□□ 0.78
CHD5Q8TDI0 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.92■□□□□ 0.78
CHD5Q8TDI0 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHD5Q8TDI0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHD5Q8TDI0 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHD5Q8TDI0 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.92■□□□□ 0.78
CHD5Q8TDI0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CHD5Q8TDI0 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHD5Q8TDI0 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHD5Q8TDI0 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.92■□□□□ 0.78
CHD5Q8TDI0 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
CHD5Q8TDI0 KSR1P1-201ENST00000446298 240 ntBASIC19.92■□□□□ 0.78
CHD5Q8TDI0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.92■□□□□ 0.78
CHD5Q8TDI0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.92■□□□□ 0.78
CHD5Q8TDI0 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.92■□□□□ 0.78
CHD5Q8TDI0 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.92■□□□□ 0.78
CHD5Q8TDI0 AC113410.3-201ENST00000623366 203 ntBASIC19.92■□□□□ 0.78
CHD5Q8TDI0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CHD5Q8TDI0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHD5Q8TDI0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.91■□□□□ 0.78
CHD5Q8TDI0 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHD5Q8TDI0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
CHD5Q8TDI0 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHD5Q8TDI0 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.91■□□□□ 0.78
CHD5Q8TDI0 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHD5Q8TDI0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHD5Q8TDI0 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CHD5Q8TDI0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.91■□□□□ 0.78
CHD5Q8TDI0 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.91■□□□□ 0.78
CHD5Q8TDI0 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.91■□□□□ 0.78
CHD5Q8TDI0 AF186192.3-201ENST00000583427 947 ntBASIC19.91■□□□□ 0.78
CHD5Q8TDI0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
CHD5Q8TDI0 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHD5Q8TDI0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHD5Q8TDI0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHD5Q8TDI0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHD5Q8TDI0 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.9■□□□□ 0.78
CHD5Q8TDI0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHD5Q8TDI0 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.9■□□□□ 0.78
CHD5Q8TDI0 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.9■□□□□ 0.78
CHD5Q8TDI0 AC026271.3-201ENST00000571884 352 ntBASIC19.9■□□□□ 0.78
CHD5Q8TDI0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHD5Q8TDI0 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHD5Q8TDI0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHD5Q8TDI0 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHD5Q8TDI0 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHD5Q8TDI0 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHD5Q8TDI0 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHD5Q8TDI0 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.9■□□□□ 0.78
CHD5Q8TDI0 AC116562.2-201ENST00000507042 360 ntBASIC19.9■□□□□ 0.78
CHD5Q8TDI0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.9■□□□□ 0.78
CHD5Q8TDI0 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.9■□□□□ 0.78
CHD5Q8TDI0 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.9■□□□□ 0.78
CHD5Q8TDI0 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.9■□□□□ 0.78
CHD5Q8TDI0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.9■□□□□ 0.78
CHD5Q8TDI0 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
CHD5Q8TDI0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CHD5Q8TDI0 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CHD5Q8TDI0 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.89■□□□□ 0.78
CHD5Q8TDI0 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
CHD5Q8TDI0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.89■□□□□ 0.78
CHD5Q8TDI0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.89■□□□□ 0.78
CHD5Q8TDI0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.89■□□□□ 0.78
CHD5Q8TDI0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CHD5Q8TDI0 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
CHD5Q8TDI0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.89■□□□□ 0.77
CHD5Q8TDI0 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.89■□□□□ 0.77
CHD5Q8TDI0 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms