Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CHD6Q8TD26 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHD6Q8TD26 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHD6Q8TD26 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
CHD6Q8TD26 RPS8P6-201ENST00000426177 609 ntBASIC17.83■□□□□ 0.44
CHD6Q8TD26 AC009065.1-201ENST00000564055 1225 ntBASIC17.83■□□□□ 0.44
CHD6Q8TD26 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.83■□□□□ 0.44
CHD6Q8TD26 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.83■□□□□ 0.44
CHD6Q8TD26 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.83■□□□□ 0.44
CHD6Q8TD26 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.83■□□□□ 0.44
CHD6Q8TD26 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.83■□□□□ 0.44
CHD6Q8TD26 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHD6Q8TD26 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.82■□□□□ 0.44
CHD6Q8TD26 DNAJB3-202ENST00000449667 1266 ntBASIC17.82■□□□□ 0.44
CHD6Q8TD26 Z85996.1-201ENST00000494644 937 ntBASIC17.82■□□□□ 0.44
CHD6Q8TD26 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CHD6Q8TD26 KRT8P36-201ENST00000489121 1440 ntBASIC17.82■□□□□ 0.44
CHD6Q8TD26 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHD6Q8TD26 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHD6Q8TD26 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
CHD6Q8TD26 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHD6Q8TD26 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHD6Q8TD26 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.82■□□□□ 0.44
CHD6Q8TD26 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CHD6Q8TD26 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
CHD6Q8TD26 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.82■□□□□ 0.44
CHD6Q8TD26 TP73-AS1-207ENST00000624167 988 ntBASIC17.82■□□□□ 0.44
CHD6Q8TD26 AC148477.8-201ENST00000624298 468 ntBASIC17.82■□□□□ 0.44
CHD6Q8TD26 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CHD6Q8TD26 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.82■□□□□ 0.44
CHD6Q8TD26 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHD6Q8TD26 ANOS2P-203ENST00000472227 1816 ntBASIC17.82■□□□□ 0.44
CHD6Q8TD26 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHD6Q8TD26 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHD6Q8TD26 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHD6Q8TD26 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.81■□□□□ 0.44
CHD6Q8TD26 AP003041.3-201ENST00000527151 707 ntBASIC17.81■□□□□ 0.44
CHD6Q8TD26 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.81■□□□□ 0.44
CHD6Q8TD26 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.81■□□□□ 0.44
CHD6Q8TD26 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CHD6Q8TD26 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHD6Q8TD26 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.81■□□□□ 0.44
CHD6Q8TD26 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.81■□□□□ 0.44
CHD6Q8TD26 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHD6Q8TD26 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHD6Q8TD26 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.81■□□□□ 0.44
CHD6Q8TD26 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.81■□□□□ 0.44
CHD6Q8TD26 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CHD6Q8TD26 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.81■□□□□ 0.44
CHD6Q8TD26 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
CHD6Q8TD26 KRT18P28-201ENST00000453838 1332 ntBASIC17.81■□□□□ 0.44
CHD6Q8TD26 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.81■□□□□ 0.44
CHD6Q8TD26 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CHD6Q8TD26 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHD6Q8TD26 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.8■□□□□ 0.44
CHD6Q8TD26 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
CHD6Q8TD26 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CHD6Q8TD26 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.8■□□□□ 0.44
CHD6Q8TD26 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.8■□□□□ 0.44
CHD6Q8TD26 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHD6Q8TD26 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.8■□□□□ 0.44
CHD6Q8TD26 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHD6Q8TD26 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHD6Q8TD26 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHD6Q8TD26 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHD6Q8TD26 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHD6Q8TD26 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CHD6Q8TD26 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHD6Q8TD26 TSPY22P-201ENST00000427496 604 ntBASIC17.8■□□□□ 0.44
CHD6Q8TD26 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.8■□□□□ 0.44
CHD6Q8TD26 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.8■□□□□ 0.44
CHD6Q8TD26 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.8■□□□□ 0.44
CHD6Q8TD26 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.8■□□□□ 0.44
CHD6Q8TD26 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.8■□□□□ 0.44
CHD6Q8TD26 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHD6Q8TD26 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.8■□□□□ 0.44
CHD6Q8TD26 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC17.8■□□□□ 0.44
CHD6Q8TD26 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHD6Q8TD26 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHD6Q8TD26 AP006587.1-201ENST00000534129 1502 ntBASIC17.8■□□□□ 0.44
CHD6Q8TD26 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CHD6Q8TD26 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHD6Q8TD26 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHD6Q8TD26 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CHD6Q8TD26 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHD6Q8TD26 HLA-V-201ENST00000429037 534 ntBASIC17.79■□□□□ 0.44
CHD6Q8TD26 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHD6Q8TD26 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.79■□□□□ 0.44
CHD6Q8TD26 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC17.79■□□□□ 0.44
CHD6Q8TD26 COX20P2-201ENST00000452636 358 ntBASIC17.79■□□□□ 0.44
CHD6Q8TD26 TOB2P1-201ENST00000469761 992 ntBASIC17.79■□□□□ 0.44
CHD6Q8TD26 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.79■□□□□ 0.44
CHD6Q8TD26 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.79■□□□□ 0.44
CHD6Q8TD26 MIR1199-201ENST00000621445 119 ntBASIC17.79■□□□□ 0.44
CHD6Q8TD26 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHD6Q8TD26 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHD6Q8TD26 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHD6Q8TD26 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHD6Q8TD26 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CHD6Q8TD26 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms