Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.21■□□□□ 0.51
BEST3Q8N1M1 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
BEST3Q8N1M1 FAM197Y1-201ENST00000421178 764 ntBASIC18.21■□□□□ 0.51
BEST3Q8N1M1 TSPY15P-201ENST00000457163 923 ntBASIC18.21■□□□□ 0.51
BEST3Q8N1M1 AP002982.1-201ENST00000492365 877 ntBASIC18.21■□□□□ 0.51
BEST3Q8N1M1 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.21■□□□□ 0.51
BEST3Q8N1M1 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.21■□□□□ 0.51
BEST3Q8N1M1 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.21■□□□□ 0.51
BEST3Q8N1M1 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.21■□□□□ 0.51
BEST3Q8N1M1 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.21■□□□□ 0.51
BEST3Q8N1M1 REXO1L12P-201ENST00000622156 912 ntBASIC18.21■□□□□ 0.51
BEST3Q8N1M1 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BEST3Q8N1M1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BEST3Q8N1M1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BEST3Q8N1M1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
BEST3Q8N1M1 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
BEST3Q8N1M1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.21■□□□□ 0.51
BEST3Q8N1M1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
BEST3Q8N1M1 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BEST3Q8N1M1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BEST3Q8N1M1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
BEST3Q8N1M1 AC116351.2-201ENST00000606540 1585 ntBASIC18.21■□□□□ 0.51
BEST3Q8N1M1 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BEST3Q8N1M1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BEST3Q8N1M1 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BEST3Q8N1M1 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
BEST3Q8N1M1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
BEST3Q8N1M1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
BEST3Q8N1M1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
BEST3Q8N1M1 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
BEST3Q8N1M1 AP006587.1-201ENST00000534129 1502 ntBASIC18.2■□□□□ 0.5
BEST3Q8N1M1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
BEST3Q8N1M1 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.2■□□□□ 0.5
BEST3Q8N1M1 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
BEST3Q8N1M1 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.2■□□□□ 0.5
BEST3Q8N1M1 AL355075.4-201ENST00000554988 638 ntBASIC18.2■□□□□ 0.5
BEST3Q8N1M1 AC073195.1-201ENST00000607241 877 ntBASIC18.2■□□□□ 0.5
BEST3Q8N1M1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BEST3Q8N1M1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
BEST3Q8N1M1 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.2■□□□□ 0.5
BEST3Q8N1M1 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BEST3Q8N1M1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.2■□□□□ 0.5
BEST3Q8N1M1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
BEST3Q8N1M1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BEST3Q8N1M1 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
BEST3Q8N1M1 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.2■□□□□ 0.5
BEST3Q8N1M1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BEST3Q8N1M1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BEST3Q8N1M1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BEST3Q8N1M1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.19■□□□□ 0.5
BEST3Q8N1M1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
BEST3Q8N1M1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
BEST3Q8N1M1 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BEST3Q8N1M1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.19■□□□□ 0.5
BEST3Q8N1M1 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
BEST3Q8N1M1 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BEST3Q8N1M1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BEST3Q8N1M1 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BEST3Q8N1M1 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
BEST3Q8N1M1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BEST3Q8N1M1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BEST3Q8N1M1 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
BEST3Q8N1M1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BEST3Q8N1M1 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.19■□□□□ 0.5
BEST3Q8N1M1 AL355355.2-201ENST00000442321 338 ntBASIC18.19■□□□□ 0.5
BEST3Q8N1M1 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.19■□□□□ 0.5
BEST3Q8N1M1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BEST3Q8N1M1 AP003071.4-201ENST00000562276 1284 ntBASIC18.19■□□□□ 0.5
BEST3Q8N1M1 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
BEST3Q8N1M1 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
BEST3Q8N1M1 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.19■□□□□ 0.5
BEST3Q8N1M1 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BEST3Q8N1M1 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.19■□□□□ 0.5
BEST3Q8N1M1 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.19■□□□□ 0.5
BEST3Q8N1M1 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.19■□□□□ 0.5
BEST3Q8N1M1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.19■□□□□ 0.5
BEST3Q8N1M1 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
BEST3Q8N1M1 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BEST3Q8N1M1 AC018553.1-201ENST00000616682 1458 ntBASIC18.19■□□□□ 0.5
BEST3Q8N1M1 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BEST3Q8N1M1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BEST3Q8N1M1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
BEST3Q8N1M1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.18■□□□□ 0.5
BEST3Q8N1M1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BEST3Q8N1M1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST3Q8N1M1 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST3Q8N1M1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST3Q8N1M1 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
BEST3Q8N1M1 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.18■□□□□ 0.5
BEST3Q8N1M1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST3Q8N1M1 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST3Q8N1M1 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST3Q8N1M1 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST3Q8N1M1 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BEST3Q8N1M1 ECEL1P3-201ENST00000427961 737 ntBASIC18.18■□□□□ 0.5
BEST3Q8N1M1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.18■□□□□ 0.5
BEST3Q8N1M1 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
BEST3Q8N1M1 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BEST3Q8N1M1 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.18■□□□□ 0.5
BEST3Q8N1M1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms