Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC24.33■■□□□ 1.49
DDX60Q8IY21 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC24.33■■□□□ 1.49
DDX60Q8IY21 RNF146-204ENST00000476956 884 ntTSL 2 BASIC24.33■■□□□ 1.49
DDX60Q8IY21 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
DDX60Q8IY21 CLN6-221ENST00000637494 765 ntTSL 5 BASIC24.33■■□□□ 1.49
DDX60Q8IY21 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC24.33■■□□□ 1.49
DDX60Q8IY21 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
DDX60Q8IY21 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
DDX60Q8IY21 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
DDX60Q8IY21 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
DDX60Q8IY21 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC24.33■■□□□ 1.49
DDX60Q8IY21 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
DDX60Q8IY21 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
DDX60Q8IY21 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC24.33■■□□□ 1.48
DDX60Q8IY21 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC24.33■■□□□ 1.48
DDX60Q8IY21 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC24.32■■□□□ 1.48
DDX60Q8IY21 AC091390.4-202ENST00000476426 537 ntBASIC24.32■■□□□ 1.48
DDX60Q8IY21 AC022616.7-201ENST00000525383 220 ntBASIC24.32■■□□□ 1.48
DDX60Q8IY21 WWOX-216ENST00000569818 525 ntBASIC24.32■■□□□ 1.48
DDX60Q8IY21 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC24.32■■□□□ 1.48
DDX60Q8IY21 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
DDX60Q8IY21 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
DDX60Q8IY21 AC020907.5-201ENST00000624372 1936 ntBASIC24.32■■□□□ 1.48
DDX60Q8IY21 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC24.32■■□□□ 1.48
DDX60Q8IY21 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
DDX60Q8IY21 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC24.32■■□□□ 1.48
DDX60Q8IY21 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC24.32■■□□□ 1.48
DDX60Q8IY21 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC24.32■■□□□ 1.48
DDX60Q8IY21 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC24.32■■□□□ 1.48
DDX60Q8IY21 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC24.32■■□□□ 1.48
DDX60Q8IY21 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC24.32■■□□□ 1.48
DDX60Q8IY21 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC24.31■■□□□ 1.48
DDX60Q8IY21 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
DDX60Q8IY21 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
DDX60Q8IY21 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC24.31■■□□□ 1.48
DDX60Q8IY21 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
DDX60Q8IY21 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
DDX60Q8IY21 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
DDX60Q8IY21 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
DDX60Q8IY21 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
DDX60Q8IY21 DET1-207ENST00000564406 2315 ntTSL 2 BASIC24.3■■□□□ 1.48
DDX60Q8IY21 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
DDX60Q8IY21 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC24.3■■□□□ 1.48
DDX60Q8IY21 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC24.3■■□□□ 1.48
DDX60Q8IY21 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC24.3■■□□□ 1.48
DDX60Q8IY21 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
DDX60Q8IY21 AC128688.1-201ENST00000487626 519 ntBASIC24.3■■□□□ 1.48
DDX60Q8IY21 SLC25A1P4-201ENST00000567977 778 ntBASIC24.3■■□□□ 1.48
DDX60Q8IY21 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC24.3■■□□□ 1.48
DDX60Q8IY21 FAM87A-204ENST00000613235 858 ntBASIC24.3■■□□□ 1.48
DDX60Q8IY21 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
DDX60Q8IY21 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
DDX60Q8IY21 EFS-203ENST00000429593 2610 ntTSL 2 BASIC24.3■■□□□ 1.48
DDX60Q8IY21 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
DDX60Q8IY21 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC24.3■■□□□ 1.48
DDX60Q8IY21 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC24.3■■□□□ 1.48
DDX60Q8IY21 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC24.3■■□□□ 1.48
DDX60Q8IY21 AC104076.2-201ENST00000448912 469 ntBASIC24.3■■□□□ 1.48
DDX60Q8IY21 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC24.3■■□□□ 1.48
DDX60Q8IY21 AP000692.2-201ENST00000608391 879 ntBASIC24.3■■□□□ 1.48
DDX60Q8IY21 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC24.3■■□□□ 1.48
DDX60Q8IY21 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC24.29■■□□□ 1.48
DDX60Q8IY21 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
DDX60Q8IY21 AC008040.2-201ENST00000461049 708 ntBASIC24.29■■□□□ 1.48
DDX60Q8IY21 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
DDX60Q8IY21 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
DDX60Q8IY21 MYC-208ENST00000641036 567 ntBASIC24.29■■□□□ 1.48
DDX60Q8IY21 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
DDX60Q8IY21 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
DDX60Q8IY21 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
DDX60Q8IY21 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
DDX60Q8IY21 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC24.28■■□□□ 1.48
DDX60Q8IY21 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
DDX60Q8IY21 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
DDX60Q8IY21 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC24.28■■□□□ 1.48
DDX60Q8IY21 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
DDX60Q8IY21 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC24.28■■□□□ 1.48
DDX60Q8IY21 EGLN1P1-201ENST00000531623 762 ntBASIC24.28■■□□□ 1.48
DDX60Q8IY21 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC24.28■■□□□ 1.48
DDX60Q8IY21 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
DDX60Q8IY21 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
DDX60Q8IY21 AL512408.1-201ENST00000569378 2000 ntBASIC24.28■■□□□ 1.48
DDX60Q8IY21 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
DDX60Q8IY21 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
DDX60Q8IY21 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
DDX60Q8IY21 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
DDX60Q8IY21 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
DDX60Q8IY21 AL137013.1-201ENST00000432946 1228 ntBASIC24.27■■□□□ 1.48
DDX60Q8IY21 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC24.27■■□□□ 1.48
DDX60Q8IY21 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC24.27■■□□□ 1.48
DDX60Q8IY21 NTF6B-201ENST00000591913 560 ntBASIC24.27■■□□□ 1.48
DDX60Q8IY21 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC24.27■■□□□ 1.48
DDX60Q8IY21 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
DDX60Q8IY21 CD37-204ENST00000535669 1674 ntTSL 2 BASIC24.27■■□□□ 1.48
DDX60Q8IY21 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
DDX60Q8IY21 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC24.27■■□□□ 1.48
DDX60Q8IY21 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
DDX60Q8IY21 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC24.27■■□□□ 1.48
DDX60Q8IY21 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
DDX60Q8IY21 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms