Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.16■□□□□ 0.5
C9orf40Q8IXQ3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.16■□□□□ 0.5
C9orf40Q8IXQ3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf40Q8IXQ3 AP006294.2-201ENST00000641667 209 ntBASIC18.16■□□□□ 0.5
C9orf40Q8IXQ3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf40Q8IXQ3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf40Q8IXQ3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
C9orf40Q8IXQ3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf40Q8IXQ3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
C9orf40Q8IXQ3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf40Q8IXQ3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.16■□□□□ 0.5
C9orf40Q8IXQ3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
C9orf40Q8IXQ3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf40Q8IXQ3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf40Q8IXQ3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf40Q8IXQ3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf40Q8IXQ3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf40Q8IXQ3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf40Q8IXQ3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf40Q8IXQ3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf40Q8IXQ3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf40Q8IXQ3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf40Q8IXQ3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf40Q8IXQ3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf40Q8IXQ3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf40Q8IXQ3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.15■□□□□ 0.5
C9orf40Q8IXQ3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf40Q8IXQ3 RARRES2P10-201ENST00000564312 460 ntBASIC18.15■□□□□ 0.5
C9orf40Q8IXQ3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf40Q8IXQ3 HTR7P1-201ENST00000538670 1336 ntBASIC18.15■□□□□ 0.5
C9orf40Q8IXQ3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf40Q8IXQ3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf40Q8IXQ3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
C9orf40Q8IXQ3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf40Q8IXQ3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf40Q8IXQ3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf40Q8IXQ3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.15■□□□□ 0.5
C9orf40Q8IXQ3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.15■□□□□ 0.5
C9orf40Q8IXQ3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.14■□□□□ 0.5
C9orf40Q8IXQ3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
C9orf40Q8IXQ3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
C9orf40Q8IXQ3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
C9orf40Q8IXQ3 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
C9orf40Q8IXQ3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
C9orf40Q8IXQ3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
C9orf40Q8IXQ3 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.14■□□□□ 0.49
C9orf40Q8IXQ3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
C9orf40Q8IXQ3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.14■□□□□ 0.49
C9orf40Q8IXQ3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.14■□□□□ 0.49
C9orf40Q8IXQ3 AC093827.2-201ENST00000512654 315 ntBASIC18.14■□□□□ 0.49
C9orf40Q8IXQ3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.14■□□□□ 0.49
C9orf40Q8IXQ3 C1QL1P1-201ENST00000568105 661 ntBASIC18.14■□□□□ 0.49
C9orf40Q8IXQ3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.14■□□□□ 0.49
C9orf40Q8IXQ3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
C9orf40Q8IXQ3 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.14■□□□□ 0.49
C9orf40Q8IXQ3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.14■□□□□ 0.49
C9orf40Q8IXQ3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
C9orf40Q8IXQ3 SLC25A24-204ENST00000569674 2357 ntBASIC18.14■□□□□ 0.49
C9orf40Q8IXQ3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
C9orf40Q8IXQ3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
C9orf40Q8IXQ3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.14■□□□□ 0.49
C9orf40Q8IXQ3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.14■□□□□ 0.49
C9orf40Q8IXQ3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.14■□□□□ 0.49
C9orf40Q8IXQ3 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.14■□□□□ 0.49
C9orf40Q8IXQ3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
C9orf40Q8IXQ3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.14■□□□□ 0.49
C9orf40Q8IXQ3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
C9orf40Q8IXQ3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.14■□□□□ 0.49
C9orf40Q8IXQ3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.14■□□□□ 0.49
C9orf40Q8IXQ3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
C9orf40Q8IXQ3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
C9orf40Q8IXQ3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.13■□□□□ 0.49
C9orf40Q8IXQ3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
C9orf40Q8IXQ3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
C9orf40Q8IXQ3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
C9orf40Q8IXQ3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
C9orf40Q8IXQ3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.13■□□□□ 0.49
C9orf40Q8IXQ3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
C9orf40Q8IXQ3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.13■□□□□ 0.49
C9orf40Q8IXQ3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.13■□□□□ 0.49
C9orf40Q8IXQ3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
C9orf40Q8IXQ3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
C9orf40Q8IXQ3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
C9orf40Q8IXQ3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
C9orf40Q8IXQ3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.13■□□□□ 0.49
C9orf40Q8IXQ3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
C9orf40Q8IXQ3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
C9orf40Q8IXQ3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
C9orf40Q8IXQ3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.13■□□□□ 0.49
C9orf40Q8IXQ3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
C9orf40Q8IXQ3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.13■□□□□ 0.49
C9orf40Q8IXQ3 Z99916.2-201ENST00000604037 246 ntBASIC18.13■□□□□ 0.49
C9orf40Q8IXQ3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
C9orf40Q8IXQ3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
C9orf40Q8IXQ3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
C9orf40Q8IXQ3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.13■□□□□ 0.49
C9orf40Q8IXQ3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.13■□□□□ 0.49
C9orf40Q8IXQ3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
C9orf40Q8IXQ3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.13■□□□□ 0.49
C9orf40Q8IXQ3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms