Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC60Q8IWA6 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC60Q8IWA6 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC60Q8IWA6 AC009237.14-201ENST00000609975 1594 ntBASIC21.87■■□□□ 1.09
CCDC60Q8IWA6 AC112907.3-201ENST00000577781 2400 ntBASIC21.86■■□□□ 1.09
CCDC60Q8IWA6 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.86■■□□□ 1.09
CCDC60Q8IWA6 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC60Q8IWA6 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.86■■□□□ 1.09
CCDC60Q8IWA6 AC087499.1-201ENST00000418141 1075 ntBASIC21.86■■□□□ 1.09
CCDC60Q8IWA6 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.86■■□□□ 1.09
CCDC60Q8IWA6 ECEL1P3-201ENST00000427961 737 ntBASIC21.86■■□□□ 1.09
CCDC60Q8IWA6 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.86■■□□□ 1.09
CCDC60Q8IWA6 RBM17P1-201ENST00000453646 1190 ntBASIC21.86■■□□□ 1.09
CCDC60Q8IWA6 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC60Q8IWA6 AC116562.2-201ENST00000507042 360 ntBASIC21.86■■□□□ 1.09
CCDC60Q8IWA6 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.86■■□□□ 1.09
CCDC60Q8IWA6 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.86■■□□□ 1.09
CCDC60Q8IWA6 HLA-A-209ENST00000638375 975 ntBASIC21.86■■□□□ 1.09
CCDC60Q8IWA6 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.86■■□□□ 1.09
CCDC60Q8IWA6 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC60Q8IWA6 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC60Q8IWA6 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC60Q8IWA6 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
CCDC60Q8IWA6 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC60Q8IWA6 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC60Q8IWA6 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.85■■□□□ 1.09
CCDC60Q8IWA6 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC60Q8IWA6 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC60Q8IWA6 AC079598.2-202ENST00000546624 1451 ntBASIC21.85■■□□□ 1.09
CCDC60Q8IWA6 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC60Q8IWA6 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC60Q8IWA6 TCF3P1-201ENST00000423021 1937 ntBASIC21.85■■□□□ 1.09
CCDC60Q8IWA6 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.85■■□□□ 1.09
CCDC60Q8IWA6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
CCDC60Q8IWA6 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.85■■□□□ 1.09
CCDC60Q8IWA6 AC004980.1-204ENST00000429707 299 ntBASIC21.85■■□□□ 1.09
CCDC60Q8IWA6 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.85■■□□□ 1.09
CCDC60Q8IWA6 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.85■■□□□ 1.09
CCDC60Q8IWA6 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.85■■□□□ 1.09
CCDC60Q8IWA6 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.85■■□□□ 1.09
CCDC60Q8IWA6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CCDC60Q8IWA6 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC60Q8IWA6 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
CCDC60Q8IWA6 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
CCDC60Q8IWA6 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC60Q8IWA6 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC60Q8IWA6 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC60Q8IWA6 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC60Q8IWA6 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CCDC60Q8IWA6 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.84■■□□□ 1.09
CCDC60Q8IWA6 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
CCDC60Q8IWA6 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.84■■□□□ 1.09
CCDC60Q8IWA6 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC60Q8IWA6 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC60Q8IWA6 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
CCDC60Q8IWA6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC60Q8IWA6 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC60Q8IWA6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC60Q8IWA6 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC60Q8IWA6 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC60Q8IWA6 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC60Q8IWA6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC60Q8IWA6 MESTP1-201ENST00000404287 994 ntBASIC21.84■■□□□ 1.09
CCDC60Q8IWA6 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC60Q8IWA6 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.84■■□□□ 1.09
CCDC60Q8IWA6 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.84■■□□□ 1.09
CCDC60Q8IWA6 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.84■■□□□ 1.09
CCDC60Q8IWA6 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.84■■□□□ 1.09
CCDC60Q8IWA6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC60Q8IWA6 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
CCDC60Q8IWA6 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CCDC60Q8IWA6 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC60Q8IWA6 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC60Q8IWA6 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC60Q8IWA6 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC60Q8IWA6 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC60Q8IWA6 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC60Q8IWA6 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.84■■□□□ 1.09
CCDC60Q8IWA6 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC60Q8IWA6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC60Q8IWA6 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.09
CCDC60Q8IWA6 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC60Q8IWA6 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC60Q8IWA6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC60Q8IWA6 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC60Q8IWA6 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC60Q8IWA6 KRT8P8-201ENST00000434750 1448 ntBASIC21.83■■□□□ 1.09
CCDC60Q8IWA6 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC60Q8IWA6 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC60Q8IWA6 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.83■■□□□ 1.09
CCDC60Q8IWA6 AL031985.4-201ENST00000642138 673 ntBASIC21.83■■□□□ 1.09
CCDC60Q8IWA6 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCDC60Q8IWA6 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.83■■□□□ 1.08
CCDC60Q8IWA6 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCDC60Q8IWA6 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC60Q8IWA6 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.82■■□□□ 1.08
CCDC60Q8IWA6 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC60Q8IWA6 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC60Q8IWA6 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC60Q8IWA6 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms