Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CTR9Q6PD62 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC23.34■■□□□ 1.33
CTR9Q6PD62 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
CTR9Q6PD62 FAM197Y1-201ENST00000421178 764 ntBASIC23.34■■□□□ 1.33
CTR9Q6PD62 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC23.34■■□□□ 1.33
CTR9Q6PD62 C1QL1P1-201ENST00000568105 661 ntBASIC23.34■■□□□ 1.33
CTR9Q6PD62 CD177P1-201ENST00000606252 935 ntBASIC23.34■■□□□ 1.33
CTR9Q6PD62 AC073195.1-201ENST00000607241 877 ntBASIC23.34■■□□□ 1.33
CTR9Q6PD62 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC23.34■■□□□ 1.33
CTR9Q6PD62 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CTR9Q6PD62 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
CTR9Q6PD62 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CTR9Q6PD62 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
CTR9Q6PD62 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC23.34■■□□□ 1.33
CTR9Q6PD62 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC23.34■■□□□ 1.33
CTR9Q6PD62 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CTR9Q6PD62 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC23.33■■□□□ 1.33
CTR9Q6PD62 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CTR9Q6PD62 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
CTR9Q6PD62 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CTR9Q6PD62 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
CTR9Q6PD62 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CTR9Q6PD62 TUBB8P6-201ENST00000436895 1288 ntBASIC23.33■■□□□ 1.33
CTR9Q6PD62 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC23.33■■□□□ 1.33
CTR9Q6PD62 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC23.33■■□□□ 1.33
CTR9Q6PD62 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC23.33■■□□□ 1.33
CTR9Q6PD62 AC112907.3-201ENST00000577781 2400 ntBASIC23.33■■□□□ 1.33
CTR9Q6PD62 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CTR9Q6PD62 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CTR9Q6PD62 TCF3P1-201ENST00000423021 1937 ntBASIC23.33■■□□□ 1.32
CTR9Q6PD62 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.32
CTR9Q6PD62 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC23.33■■□□□ 1.32
CTR9Q6PD62 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC23.33■■□□□ 1.32
CTR9Q6PD62 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CTR9Q6PD62 AC009237.14-201ENST00000609975 1594 ntBASIC23.32■■□□□ 1.32
CTR9Q6PD62 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC23.32■■□□□ 1.32
CTR9Q6PD62 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC23.32■■□□□ 1.32
CTR9Q6PD62 LINC01521-201ENST00000504184 1943 ntBASIC23.32■■□□□ 1.32
CTR9Q6PD62 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
CTR9Q6PD62 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CTR9Q6PD62 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC23.32■■□□□ 1.32
CTR9Q6PD62 AP002982.1-201ENST00000492365 877 ntBASIC23.32■■□□□ 1.32
CTR9Q6PD62 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC23.32■■□□□ 1.32
CTR9Q6PD62 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC23.32■■□□□ 1.32
CTR9Q6PD62 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC23.32■■□□□ 1.32
CTR9Q6PD62 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
CTR9Q6PD62 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CTR9Q6PD62 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC23.32■■□□□ 1.32
CTR9Q6PD62 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC23.31■■□□□ 1.32
CTR9Q6PD62 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC23.31■■□□□ 1.32
CTR9Q6PD62 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CTR9Q6PD62 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC23.31■■□□□ 1.32
CTR9Q6PD62 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CTR9Q6PD62 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CTR9Q6PD62 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC23.31■■□□□ 1.32
CTR9Q6PD62 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC23.31■■□□□ 1.32
CTR9Q6PD62 NIFKP9-201ENST00000419265 221 ntBASIC23.31■■□□□ 1.32
CTR9Q6PD62 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
CTR9Q6PD62 TSPY15P-201ENST00000457163 923 ntBASIC23.31■■□□□ 1.32
CTR9Q6PD62 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
CTR9Q6PD62 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC23.31■■□□□ 1.32
CTR9Q6PD62 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CTR9Q6PD62 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CTR9Q6PD62 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CTR9Q6PD62 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC23.31■■□□□ 1.32
CTR9Q6PD62 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CTR9Q6PD62 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CTR9Q6PD62 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
CTR9Q6PD62 SRI-203ENST00000419179 1307 ntTSL 2 BASIC23.31■■□□□ 1.32
CTR9Q6PD62 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CTR9Q6PD62 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
CTR9Q6PD62 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
CTR9Q6PD62 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC23.3■■□□□ 1.32
CTR9Q6PD62 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CTR9Q6PD62 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CTR9Q6PD62 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
CTR9Q6PD62 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CTR9Q6PD62 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
CTR9Q6PD62 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC23.3■■□□□ 1.32
CTR9Q6PD62 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CTR9Q6PD62 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CTR9Q6PD62 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC23.29■■□□□ 1.32
CTR9Q6PD62 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CTR9Q6PD62 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CTR9Q6PD62 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC23.29■■□□□ 1.32
CTR9Q6PD62 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC23.29■■□□□ 1.32
CTR9Q6PD62 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
CTR9Q6PD62 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
CTR9Q6PD62 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC23.29■■□□□ 1.32
CTR9Q6PD62 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
CTR9Q6PD62 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CTR9Q6PD62 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC23.29■■□□□ 1.32
CTR9Q6PD62 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC23.29■■□□□ 1.32
CTR9Q6PD62 DHDH-203ENST00000522614 776 ntTSL 5 BASIC23.29■■□□□ 1.32
CTR9Q6PD62 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC23.29■■□□□ 1.32
CTR9Q6PD62 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC23.29■■□□□ 1.32
CTR9Q6PD62 MIR4785-201ENST00000585005 73 ntBASIC23.29■■□□□ 1.32
CTR9Q6PD62 AC026471.5-201ENST00000615068 467 ntBASIC23.29■■□□□ 1.32
CTR9Q6PD62 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC23.29■■□□□ 1.32
CTR9Q6PD62 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms