Protein–RNA interactions for Protein: Q5SZB4

C9orf50, Uncharacterized protein C9orf50, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50Q5SZB4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
C9orf50Q5SZB4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
C9orf50Q5SZB4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.13■□□□□ 0.97
C9orf50Q5SZB4 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
C9orf50Q5SZB4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
C9orf50Q5SZB4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.13■□□□□ 0.97
C9orf50Q5SZB4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.13■□□□□ 0.97
C9orf50Q5SZB4 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
C9orf50Q5SZB4 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
C9orf50Q5SZB4 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.13■□□□□ 0.97
C9orf50Q5SZB4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
C9orf50Q5SZB4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
C9orf50Q5SZB4 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
C9orf50Q5SZB4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
C9orf50Q5SZB4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
C9orf50Q5SZB4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
C9orf50Q5SZB4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
C9orf50Q5SZB4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
C9orf50Q5SZB4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.12■□□□□ 0.97
C9orf50Q5SZB4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
C9orf50Q5SZB4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
C9orf50Q5SZB4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.12■□□□□ 0.97
C9orf50Q5SZB4 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.12■□□□□ 0.97
C9orf50Q5SZB4 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC21.12■□□□□ 0.97
C9orf50Q5SZB4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
C9orf50Q5SZB4 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.12■□□□□ 0.97
C9orf50Q5SZB4 AC242852.2-201ENST00000615738 1807 ntBASIC21.12■□□□□ 0.97
C9orf50Q5SZB4 AC121338.2-201ENST00000622535 1744 ntBASIC21.12■□□□□ 0.97
C9orf50Q5SZB4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
C9orf50Q5SZB4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
C9orf50Q5SZB4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
C9orf50Q5SZB4 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
C9orf50Q5SZB4 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
C9orf50Q5SZB4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
C9orf50Q5SZB4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
C9orf50Q5SZB4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC21.11■□□□□ 0.97
C9orf50Q5SZB4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC21.11■□□□□ 0.97
C9orf50Q5SZB4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.11■□□□□ 0.97
C9orf50Q5SZB4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
C9orf50Q5SZB4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
C9orf50Q5SZB4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.11■□□□□ 0.97
C9orf50Q5SZB4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.1■□□□□ 0.97
C9orf50Q5SZB4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.1■□□□□ 0.97
C9orf50Q5SZB4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
C9orf50Q5SZB4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
C9orf50Q5SZB4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.1■□□□□ 0.97
C9orf50Q5SZB4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
C9orf50Q5SZB4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
C9orf50Q5SZB4 PPIH-202ENST00000372549 327 ntTSL 3 BASIC21.1■□□□□ 0.97
C9orf50Q5SZB4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
C9orf50Q5SZB4 AP000523.1-201ENST00000398242 1049 ntBASIC21.1■□□□□ 0.97
C9orf50Q5SZB4 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.1■□□□□ 0.97
C9orf50Q5SZB4 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.1■□□□□ 0.97
C9orf50Q5SZB4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
C9orf50Q5SZB4 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.1■□□□□ 0.97
C9orf50Q5SZB4 MIR3180-1-201ENST00000580374 94 ntBASIC21.1■□□□□ 0.97
C9orf50Q5SZB4 MIR3180-3-201ENST00000584616 94 ntBASIC21.1■□□□□ 0.97
C9orf50Q5SZB4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.1■□□□□ 0.97
C9orf50Q5SZB4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
C9orf50Q5SZB4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
C9orf50Q5SZB4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.1■□□□□ 0.97
C9orf50Q5SZB4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
C9orf50Q5SZB4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
C9orf50Q5SZB4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
C9orf50Q5SZB4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
C9orf50Q5SZB4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
C9orf50Q5SZB4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
C9orf50Q5SZB4 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
C9orf50Q5SZB4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
C9orf50Q5SZB4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
C9orf50Q5SZB4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.09■□□□□ 0.97
C9orf50Q5SZB4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.09■□□□□ 0.97
C9orf50Q5SZB4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC21.09■□□□□ 0.97
C9orf50Q5SZB4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.09■□□□□ 0.97
C9orf50Q5SZB4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.09■□□□□ 0.97
C9orf50Q5SZB4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC21.09■□□□□ 0.97
C9orf50Q5SZB4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
C9orf50Q5SZB4 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC21.09■□□□□ 0.97
C9orf50Q5SZB4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.09■□□□□ 0.97
C9orf50Q5SZB4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC21.09■□□□□ 0.97
C9orf50Q5SZB4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.09■□□□□ 0.97
C9orf50Q5SZB4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.09■□□□□ 0.97
C9orf50Q5SZB4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.09■□□□□ 0.97
C9orf50Q5SZB4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
C9orf50Q5SZB4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
C9orf50Q5SZB4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
C9orf50Q5SZB4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
C9orf50Q5SZB4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
C9orf50Q5SZB4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
C9orf50Q5SZB4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
C9orf50Q5SZB4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
C9orf50Q5SZB4 EMBP1-201ENST00000458200 901 ntBASIC21.08■□□□□ 0.97
C9orf50Q5SZB4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
C9orf50Q5SZB4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC21.08■□□□□ 0.97
C9orf50Q5SZB4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.08■□□□□ 0.97
C9orf50Q5SZB4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21.08■□□□□ 0.97
C9orf50Q5SZB4 IFNL4P1-201ENST00000607083 540 ntBASIC21.08■□□□□ 0.97
C9orf50Q5SZB4 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC21.08■□□□□ 0.97
C9orf50Q5SZB4 AL031008.1-201ENST00000619963 541 ntBASIC21.08■□□□□ 0.97
C9orf50Q5SZB4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms