Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 Z82202.1-201ENST00000623446 1880 ntBASIC17.73■□□□□ 0.43
RPS4XP62701 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPS4XP62701 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
RPS4XP62701 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPS4XP62701 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPS4XP62701 AC018445.3-201ENST00000624177 1945 ntBASIC17.72■□□□□ 0.43
RPS4XP62701 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
RPS4XP62701 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPS4XP62701 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RPS4XP62701 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
RPS4XP62701 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPS4XP62701 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPS4XP62701 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.72■□□□□ 0.43
RPS4XP62701 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.72■□□□□ 0.43
RPS4XP62701 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.72■□□□□ 0.43
RPS4XP62701 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.72■□□□□ 0.43
RPS4XP62701 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.72■□□□□ 0.43
RPS4XP62701 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RPS4XP62701 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RPS4XP62701 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.72■□□□□ 0.43
RPS4XP62701 AC098590.1-201ENST00000468126 897 ntBASIC17.72■□□□□ 0.43
RPS4XP62701 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RPS4XP62701 UNC93B5-201ENST00000530315 699 ntBASIC17.72■□□□□ 0.43
RPS4XP62701 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.72■□□□□ 0.43
RPS4XP62701 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPS4XP62701 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPS4XP62701 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPS4XP62701 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RPS4XP62701 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
RPS4XP62701 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPS4XP62701 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPS4XP62701 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPS4XP62701 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPS4XP62701 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPS4XP62701 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RPS4XP62701 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.71■□□□□ 0.43
RPS4XP62701 GCSHP5-201ENST00000443090 522 ntBASIC17.71■□□□□ 0.43
RPS4XP62701 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.71■□□□□ 0.43
RPS4XP62701 AC128676.1-201ENST00000454392 318 ntBASIC17.71■□□□□ 0.43
RPS4XP62701 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.71■□□□□ 0.43
RPS4XP62701 AC026366.1-201ENST00000488803 879 ntBASIC17.71■□□□□ 0.43
RPS4XP62701 AP003097.1-201ENST00000530657 1135 ntBASIC17.71■□□□□ 0.43
RPS4XP62701 AC005829.2-201ENST00000571422 1056 ntBASIC17.71■□□□□ 0.43
RPS4XP62701 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RPS4XP62701 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPS4XP62701 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPS4XP62701 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPS4XP62701 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.71■□□□□ 0.43
RPS4XP62701 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPS4XP62701 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPS4XP62701 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPS4XP62701 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RPS4XP62701 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.7■□□□□ 0.42
RPS4XP62701 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RPS4XP62701 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPS4XP62701 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RPS4XP62701 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPS4XP62701 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.7■□□□□ 0.42
RPS4XP62701 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.7■□□□□ 0.42
RPS4XP62701 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPS4XP62701 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.7■□□□□ 0.42
RPS4XP62701 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPS4XP62701 AL158047.1-201ENST00000445918 881 ntBASIC17.7■□□□□ 0.42
RPS4XP62701 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RPS4XP62701 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.7■□□□□ 0.42
RPS4XP62701 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.7■□□□□ 0.42
RPS4XP62701 AC142381.4-202ENST00000563973 229 ntBASIC17.7■□□□□ 0.42
RPS4XP62701 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.7■□□□□ 0.42
RPS4XP62701 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.7■□□□□ 0.42
RPS4XP62701 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RPS4XP62701 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.7■□□□□ 0.42
RPS4XP62701 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RPS4XP62701 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RPS4XP62701 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.69■□□□□ 0.42
RPS4XP62701 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RPS4XP62701 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RPS4XP62701 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RPS4XP62701 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.69■□□□□ 0.42
RPS4XP62701 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPS4XP62701 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.69■□□□□ 0.42
RPS4XP62701 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RPS4XP62701 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RPS4XP62701 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPS4XP62701 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPS4XP62701 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.69■□□□□ 0.42
RPS4XP62701 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.69■□□□□ 0.42
RPS4XP62701 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPS4XP62701 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.69■□□□□ 0.42
RPS4XP62701 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.69■□□□□ 0.42
RPS4XP62701 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPS4XP62701 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.69■□□□□ 0.42
RPS4XP62701 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.69■□□□□ 0.42
RPS4XP62701 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.69■□□□□ 0.42
RPS4XP62701 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RPS4XP62701 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RPS4XP62701 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RPS4XP62701 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPS4XP62701 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RPS4XP62701 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.69■□□□□ 0.42
RPS4XP62701 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms