Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
SRP54P61011 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.36■□□□□ 0.69
SRP54P61011 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SRP54P61011 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SRP54P61011 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SRP54P61011 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SRP54P61011 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SRP54P61011 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SRP54P61011 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.36■□□□□ 0.69
SRP54P61011 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.36■□□□□ 0.69
SRP54P61011 C1QL1P1-201ENST00000568105 661 ntBASIC19.36■□□□□ 0.69
SRP54P61011 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SRP54P61011 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SRP54P61011 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SRP54P61011 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SRP54P61011 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SRP54P61011 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
SRP54P61011 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SRP54P61011 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SRP54P61011 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
SRP54P61011 KRT16P1-201ENST00000399124 1418 ntBASIC19.35■□□□□ 0.69
SRP54P61011 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.35■□□□□ 0.69
SRP54P61011 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
SRP54P61011 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.35■□□□□ 0.69
SRP54P61011 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
SRP54P61011 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SRP54P61011 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRP54P61011 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.35■□□□□ 0.69
SRP54P61011 AC087499.1-201ENST00000418141 1075 ntBASIC19.35■□□□□ 0.69
SRP54P61011 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.35■□□□□ 0.69
SRP54P61011 TUBB8P6-201ENST00000436895 1288 ntBASIC19.35■□□□□ 0.69
SRP54P61011 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SRP54P61011 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.35■□□□□ 0.69
SRP54P61011 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.35■□□□□ 0.69
SRP54P61011 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.35■□□□□ 0.69
SRP54P61011 KRT18P16-201ENST00000510337 1294 ntBASIC19.35■□□□□ 0.69
SRP54P61011 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.35■□□□□ 0.69
SRP54P61011 LINC01023-201ENST00000606054 436 ntBASIC19.35■□□□□ 0.69
SRP54P61011 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRP54P61011 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.35■□□□□ 0.69
SRP54P61011 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.35■□□□□ 0.69
SRP54P61011 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRP54P61011 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRP54P61011 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
SRP54P61011 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRP54P61011 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.35■□□□□ 0.69
SRP54P61011 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SRP54P61011 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRP54P61011 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRP54P61011 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.35■□□□□ 0.69
SRP54P61011 AC073314.1-201ENST00000568729 2216 ntBASIC19.35■□□□□ 0.69
SRP54P61011 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRP54P61011 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
SRP54P61011 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SRP54P61011 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SRP54P61011 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.34■□□□□ 0.69
SRP54P61011 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SRP54P61011 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SRP54P61011 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SRP54P61011 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SRP54P61011 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SRP54P61011 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.34■□□□□ 0.69
SRP54P61011 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.34■□□□□ 0.69
SRP54P61011 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SRP54P61011 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.34■□□□□ 0.69
SRP54P61011 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SRP54P61011 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SRP54P61011 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SRP54P61011 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SRP54P61011 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SRP54P61011 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SRP54P61011 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.33■□□□□ 0.69
SRP54P61011 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SRP54P61011 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SRP54P61011 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.33■□□□□ 0.69
SRP54P61011 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
SRP54P61011 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SRP54P61011 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SRP54P61011 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SRP54P61011 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.33■□□□□ 0.69
SRP54P61011 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
SRP54P61011 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
SRP54P61011 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SRP54P61011 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
SRP54P61011 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SRP54P61011 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.33■□□□□ 0.68
SRP54P61011 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SRP54P61011 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.33■□□□□ 0.68
SRP54P61011 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.33■□□□□ 0.68
SRP54P61011 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.33■□□□□ 0.68
SRP54P61011 REXO1L10P-201ENST00000615707 1290 ntBASIC19.33■□□□□ 0.68
SRP54P61011 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.33■□□□□ 0.68
SRP54P61011 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.33■□□□□ 0.68
SRP54P61011 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SRP54P61011 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SRP54P61011 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.33■□□□□ 0.68
SRP54P61011 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SRP54P61011 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SRP54P61011 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SRP54P61011 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms