Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RXRGP48443 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RXRGP48443 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RXRGP48443 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RXRGP48443 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.63■□□□□ 0.73
RXRGP48443 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RXRGP48443 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.63■□□□□ 0.73
RXRGP48443 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RXRGP48443 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.63■□□□□ 0.73
RXRGP48443 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RXRGP48443 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RXRGP48443 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RXRGP48443 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RXRGP48443 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RXRGP48443 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RXRGP48443 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RXRGP48443 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
RXRGP48443 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RXRGP48443 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RXRGP48443 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.62■□□□□ 0.73
RXRGP48443 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RXRGP48443 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RXRGP48443 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RXRGP48443 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RXRGP48443 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RXRGP48443 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RXRGP48443 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RXRGP48443 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RXRGP48443 MMP23A-201ENST00000234610 1017 ntBASIC19.62■□□□□ 0.73
RXRGP48443 HLA-G-202ENST00000376815 851 ntBASIC19.62■□□□□ 0.73
RXRGP48443 HLA-G-203ENST00000376818 1127 ntBASIC19.62■□□□□ 0.73
RXRGP48443 FAM197Y1-201ENST00000421178 764 ntBASIC19.62■□□□□ 0.73
RXRGP48443 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RXRGP48443 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.62■□□□□ 0.73
RXRGP48443 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
RXRGP48443 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.62■□□□□ 0.73
RXRGP48443 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.62■□□□□ 0.73
RXRGP48443 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
RXRGP48443 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.62■□□□□ 0.73
RXRGP48443 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.62■□□□□ 0.73
RXRGP48443 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.62■□□□□ 0.73
RXRGP48443 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RXRGP48443 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RXRGP48443 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
RXRGP48443 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
RXRGP48443 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RXRGP48443 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
RXRGP48443 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.62■□□□□ 0.73
RXRGP48443 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.62■□□□□ 0.73
RXRGP48443 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RXRGP48443 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RXRGP48443 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RXRGP48443 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
RXRGP48443 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RXRGP48443 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RXRGP48443 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RXRGP48443 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RXRGP48443 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RXRGP48443 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RXRGP48443 RCN1P1-201ENST00000400413 996 ntBASIC19.61■□□□□ 0.73
RXRGP48443 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RXRGP48443 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RXRGP48443 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.61■□□□□ 0.73
RXRGP48443 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RXRGP48443 AC121338.2-201ENST00000622535 1744 ntBASIC19.61■□□□□ 0.73
RXRGP48443 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RXRGP48443 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.61■□□□□ 0.73
RXRGP48443 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RXRGP48443 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RXRGP48443 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.61■□□□□ 0.73
RXRGP48443 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RXRGP48443 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.6■□□□□ 0.73
RXRGP48443 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RXRGP48443 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RXRGP48443 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.6■□□□□ 0.73
RXRGP48443 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RXRGP48443 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RXRGP48443 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
RXRGP48443 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RXRGP48443 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RXRGP48443 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.6■□□□□ 0.73
RXRGP48443 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.6■□□□□ 0.73
RXRGP48443 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RXRGP48443 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.6■□□□□ 0.73
RXRGP48443 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.6■□□□□ 0.73
RXRGP48443 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RXRGP48443 AL020996.1-203ENST00000536896 2307 ntBASIC19.6■□□□□ 0.73
RXRGP48443 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RXRGP48443 LINC01006-201ENST00000333319 2292 ntBASIC19.6■□□□□ 0.73
RXRGP48443 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RXRGP48443 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RXRGP48443 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RXRGP48443 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RXRGP48443 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
RXRGP48443 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RXRGP48443 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RXRGP48443 PTBP1P-201ENST00000554374 1601 ntBASIC19.59■□□□□ 0.73
RXRGP48443 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.59■□□□□ 0.73
RXRGP48443 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RXRGP48443 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms