Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
KRT9P35527 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
KRT9P35527 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
KRT9P35527 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
KRT9P35527 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.45■■□□□ 1.02
KRT9P35527 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
KRT9P35527 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
KRT9P35527 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
KRT9P35527 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
KRT9P35527 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
KRT9P35527 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
KRT9P35527 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
KRT9P35527 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
KRT9P35527 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.44■■□□□ 1.02
KRT9P35527 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
KRT9P35527 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
KRT9P35527 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
KRT9P35527 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
KRT9P35527 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
KRT9P35527 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
KRT9P35527 KRT17P1-201ENST00000399211 1546 ntBASIC21.44■■□□□ 1.02
KRT9P35527 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.44■■□□□ 1.02
KRT9P35527 AC093503.3-201ENST00000624917 2352 ntBASIC21.44■■□□□ 1.02
KRT9P35527 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
KRT9P35527 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
KRT9P35527 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.43■■□□□ 1.02
KRT9P35527 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
KRT9P35527 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.43■■□□□ 1.02
KRT9P35527 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
KRT9P35527 LSM12P1-201ENST00000411836 588 ntBASIC21.43■■□□□ 1.02
KRT9P35527 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.43■■□□□ 1.02
KRT9P35527 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.43■■□□□ 1.02
KRT9P35527 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.43■■□□□ 1.02
KRT9P35527 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.43■■□□□ 1.02
KRT9P35527 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
KRT9P35527 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
KRT9P35527 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.43■■□□□ 1.02
KRT9P35527 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
KRT9P35527 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.43■■□□□ 1.02
KRT9P35527 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
KRT9P35527 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
KRT9P35527 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.43■■□□□ 1.02
KRT9P35527 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
KRT9P35527 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
KRT9P35527 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
KRT9P35527 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
KRT9P35527 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
KRT9P35527 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.43■■□□□ 1.02
KRT9P35527 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
KRT9P35527 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
KRT9P35527 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
KRT9P35527 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.42■■□□□ 1.02
KRT9P35527 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
KRT9P35527 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
KRT9P35527 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
KRT9P35527 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
KRT9P35527 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
KRT9P35527 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.42■■□□□ 1.02
KRT9P35527 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.42■■□□□ 1.02
KRT9P35527 AC083906.2-201ENST00000511578 360 ntBASIC21.42■■□□□ 1.02
KRT9P35527 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.42■■□□□ 1.02
KRT9P35527 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
KRT9P35527 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.42■■□□□ 1.02
KRT9P35527 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
KRT9P35527 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
KRT9P35527 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.42■■□□□ 1.02
KRT9P35527 AL121832.2-201ENST00000610979 668 ntBASIC21.42■■□□□ 1.02
KRT9P35527 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.42■■□□□ 1.02
KRT9P35527 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.42■■□□□ 1.02
KRT9P35527 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
KRT9P35527 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.41■■□□□ 1.02
KRT9P35527 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
KRT9P35527 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
KRT9P35527 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
KRT9P35527 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.41■■□□□ 1.02
KRT9P35527 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
KRT9P35527 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
KRT9P35527 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.41■■□□□ 1.02
KRT9P35527 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.41■■□□□ 1.02
KRT9P35527 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.41■■□□□ 1.02
KRT9P35527 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.41■■□□□ 1.02
KRT9P35527 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.41■■□□□ 1.02
KRT9P35527 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
KRT9P35527 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.41■■□□□ 1.02
KRT9P35527 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
KRT9P35527 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
KRT9P35527 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
KRT9P35527 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
KRT9P35527 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
KRT9P35527 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
KRT9P35527 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
KRT9P35527 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
KRT9P35527 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
KRT9P35527 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.4■■□□□ 1.02
KRT9P35527 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.4■■□□□ 1.02
KRT9P35527 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
KRT9P35527 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
KRT9P35527 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
KRT9P35527 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
KRT9P35527 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms