Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
COL11A1P12107 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC22.42■■□□□ 1.18
COL11A1P12107 AL512408.1-201ENST00000569378 2000 ntBASIC22.42■■□□□ 1.18
COL11A1P12107 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
COL11A1P12107 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL11A1P12107 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
COL11A1P12107 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC22.41■■□□□ 1.18
COL11A1P12107 DERL1-203ENST00000419562 918 ntTSL 2 BASIC22.41■■□□□ 1.18
COL11A1P12107 LIN28AP1-201ENST00000429574 405 ntBASIC22.41■■□□□ 1.18
COL11A1P12107 AC007663.1-201ENST00000438948 1240 ntBASIC22.41■■□□□ 1.18
COL11A1P12107 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC22.41■■□□□ 1.18
COL11A1P12107 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC22.41■■□□□ 1.18
COL11A1P12107 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC22.41■■□□□ 1.18
COL11A1P12107 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC22.41■■□□□ 1.18
COL11A1P12107 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
COL11A1P12107 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL11A1P12107 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
COL11A1P12107 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL11A1P12107 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC22.4■■□□□ 1.18
COL11A1P12107 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC22.4■■□□□ 1.18
COL11A1P12107 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
COL11A1P12107 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
COL11A1P12107 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC22.4■■□□□ 1.18
COL11A1P12107 AC104076.2-201ENST00000448912 469 ntBASIC22.4■■□□□ 1.18
COL11A1P12107 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL11A1P12107 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL11A1P12107 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL11A1P12107 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC22.39■■□□□ 1.18
COL11A1P12107 HMGA1P5-201ENST00000412453 271 ntBASIC22.39■■□□□ 1.17
COL11A1P12107 AK4P3-201ENST00000418260 669 ntBASIC22.39■■□□□ 1.17
COL11A1P12107 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.17
COL11A1P12107 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC22.39■■□□□ 1.17
COL11A1P12107 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
COL11A1P12107 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
COL11A1P12107 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
COL11A1P12107 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
COL11A1P12107 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL11A1P12107 ANKRD20A18P-201ENST00000359341 492 ntBASIC22.38■■□□□ 1.17
COL11A1P12107 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC22.38■■□□□ 1.17
COL11A1P12107 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC22.38■■□□□ 1.17
COL11A1P12107 LINC01465-201ENST00000408887 1940 ntBASIC22.38■■□□□ 1.17
COL11A1P12107 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL11A1P12107 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC22.38■■□□□ 1.17
COL11A1P12107 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
COL11A1P12107 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL11A1P12107 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC22.38■■□□□ 1.17
COL11A1P12107 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
COL11A1P12107 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.38■■□□□ 1.17
COL11A1P12107 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL11A1P12107 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC22.37■■□□□ 1.17
COL11A1P12107 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
COL11A1P12107 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
COL11A1P12107 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL11A1P12107 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL11A1P12107 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC22.37■■□□□ 1.17
COL11A1P12107 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
COL11A1P12107 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC22.37■■□□□ 1.17
COL11A1P12107 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC22.37■■□□□ 1.17
COL11A1P12107 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC22.37■■□□□ 1.17
COL11A1P12107 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
COL11A1P12107 AP000692.2-201ENST00000608391 879 ntBASIC22.37■■□□□ 1.17
COL11A1P12107 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
COL11A1P12107 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
COL11A1P12107 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC22.37■■□□□ 1.17
COL11A1P12107 MYC-208ENST00000641036 567 ntBASIC22.37■■□□□ 1.17
COL11A1P12107 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC22.37■■□□□ 1.17
COL11A1P12107 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC22.37■■□□□ 1.17
COL11A1P12107 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
COL11A1P12107 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL11A1P12107 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
COL11A1P12107 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
COL11A1P12107 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL11A1P12107 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC22.37■■□□□ 1.17
COL11A1P12107 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
COL11A1P12107 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC22.36■■□□□ 1.17
COL11A1P12107 AL137013.1-201ENST00000432946 1228 ntBASIC22.36■■□□□ 1.17
COL11A1P12107 GXYLT1P6-201ENST00000456472 1187 ntBASIC22.36■■□□□ 1.17
COL11A1P12107 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL11A1P12107 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL11A1P12107 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL11A1P12107 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
COL11A1P12107 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL11A1P12107 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
COL11A1P12107 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.36■■□□□ 1.17
COL11A1P12107 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL11A1P12107 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC22.36■■□□□ 1.17
COL11A1P12107 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC22.36■■□□□ 1.17
COL11A1P12107 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
COL11A1P12107 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC22.36■■□□□ 1.17
COL11A1P12107 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC22.36■■□□□ 1.17
COL11A1P12107 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC22.36■■□□□ 1.17
COL11A1P12107 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC22.36■■□□□ 1.17
COL11A1P12107 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL11A1P12107 KRT8P41-201ENST00000533985 1514 ntBASIC22.35■■□□□ 1.17
COL11A1P12107 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC22.35■■□□□ 1.17
COL11A1P12107 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
COL11A1P12107 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC22.35■■□□□ 1.17
COL11A1P12107 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL11A1P12107 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC22.35■■□□□ 1.17
COL11A1P12107 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC22.35■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms