Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RAB40ALP0C0E4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.52■□□□□ 0.55
RAB40ALP0C0E4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAB40ALP0C0E4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAB40ALP0C0E4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RAB40ALP0C0E4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAB40ALP0C0E4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAB40ALP0C0E4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAB40ALP0C0E4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAB40ALP0C0E4 AC079598.2-202ENST00000546624 1451 ntBASIC18.52■□□□□ 0.55
RAB40ALP0C0E4 AC018553.1-201ENST00000616682 1458 ntBASIC18.52■□□□□ 0.55
RAB40ALP0C0E4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAB40ALP0C0E4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB40ALP0C0E4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB40ALP0C0E4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB40ALP0C0E4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB40ALP0C0E4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
RAB40ALP0C0E4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB40ALP0C0E4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.51■□□□□ 0.55
RAB40ALP0C0E4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.51■□□□□ 0.55
RAB40ALP0C0E4 KRT18P16-201ENST00000510337 1294 ntBASIC18.51■□□□□ 0.55
RAB40ALP0C0E4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.51■□□□□ 0.55
RAB40ALP0C0E4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.51■□□□□ 0.55
RAB40ALP0C0E4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB40ALP0C0E4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAB40ALP0C0E4 AL445675.2-201ENST00000620291 557 ntBASIC18.51■□□□□ 0.55
RAB40ALP0C0E4 AL031985.4-201ENST00000642138 673 ntBASIC18.51■□□□□ 0.55
RAB40ALP0C0E4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAB40ALP0C0E4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.51■□□□□ 0.55
RAB40ALP0C0E4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.51■□□□□ 0.55
RAB40ALP0C0E4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
RAB40ALP0C0E4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB40ALP0C0E4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.51■□□□□ 0.55
RAB40ALP0C0E4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
RAB40ALP0C0E4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB40ALP0C0E4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB40ALP0C0E4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB40ALP0C0E4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB40ALP0C0E4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.5■□□□□ 0.55
RAB40ALP0C0E4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.5■□□□□ 0.55
RAB40ALP0C0E4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.5■□□□□ 0.55
RAB40ALP0C0E4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.5■□□□□ 0.55
RAB40ALP0C0E4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.5■□□□□ 0.55
RAB40ALP0C0E4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB40ALP0C0E4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.5■□□□□ 0.55
RAB40ALP0C0E4 TUBB8P6-201ENST00000436895 1288 ntBASIC18.5■□□□□ 0.55
RAB40ALP0C0E4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.5■□□□□ 0.55
RAB40ALP0C0E4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.5■□□□□ 0.55
RAB40ALP0C0E4 AP000525.1-201ENST00000608286 694 ntBASIC18.5■□□□□ 0.55
RAB40ALP0C0E4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.5■□□□□ 0.55
RAB40ALP0C0E4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
RAB40ALP0C0E4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.5■□□□□ 0.55
RAB40ALP0C0E4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.5■□□□□ 0.55
RAB40ALP0C0E4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB40ALP0C0E4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB40ALP0C0E4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RAB40ALP0C0E4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RAB40ALP0C0E4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB40ALP0C0E4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB40ALP0C0E4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAB40ALP0C0E4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAB40ALP0C0E4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB40ALP0C0E4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.49■□□□□ 0.55
RAB40ALP0C0E4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAB40ALP0C0E4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.49■□□□□ 0.55
RAB40ALP0C0E4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RAB40ALP0C0E4 AC026271.3-201ENST00000571884 352 ntBASIC18.49■□□□□ 0.55
RAB40ALP0C0E4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.49■□□□□ 0.55
RAB40ALP0C0E4 AC145285.6-201ENST00000604632 637 ntBASIC18.49■□□□□ 0.55
RAB40ALP0C0E4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB40ALP0C0E4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAB40ALP0C0E4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RAB40ALP0C0E4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB40ALP0C0E4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.49■□□□□ 0.55
RAB40ALP0C0E4 PHGDH-210ENST00000641115 1638 ntBASIC18.49■□□□□ 0.55
RAB40ALP0C0E4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB40ALP0C0E4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.48■□□□□ 0.55
RAB40ALP0C0E4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.48■□□□□ 0.55
RAB40ALP0C0E4 LINC01006-201ENST00000333319 2292 ntBASIC18.48■□□□□ 0.55
RAB40ALP0C0E4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB40ALP0C0E4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.48■□□□□ 0.55
RAB40ALP0C0E4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB40ALP0C0E4 RCN1P1-201ENST00000400413 996 ntBASIC18.48■□□□□ 0.55
RAB40ALP0C0E4 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.48■□□□□ 0.55
RAB40ALP0C0E4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RAB40ALP0C0E4 FITM1-202ENST00000559294 800 ntBASIC18.48■□□□□ 0.55
RAB40ALP0C0E4 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.48■□□□□ 0.55
RAB40ALP0C0E4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.48■□□□□ 0.55
RAB40ALP0C0E4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RAB40ALP0C0E4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.48■□□□□ 0.55
RAB40ALP0C0E4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB40ALP0C0E4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB40ALP0C0E4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.48■□□□□ 0.55
RAB40ALP0C0E4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RAB40ALP0C0E4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RAB40ALP0C0E4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.48■□□□□ 0.55
RAB40ALP0C0E4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB40ALP0C0E4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.47■□□□□ 0.55
RAB40ALP0C0E4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RAB40ALP0C0E4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms