Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC22.25■■□□□ 1.15
HOXC6P09630 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC22.25■■□□□ 1.15
HOXC6P09630 CLN6-204ENST00000564752 900 ntTSL 3 BASIC22.25■■□□□ 1.15
HOXC6P09630 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC22.25■■□□□ 1.15
HOXC6P09630 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
HOXC6P09630 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC22.25■■□□□ 1.15
HOXC6P09630 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HOXC6P09630 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC22.25■■□□□ 1.15
HOXC6P09630 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC22.25■■□□□ 1.15
HOXC6P09630 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HOXC6P09630 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
HOXC6P09630 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
HOXC6P09630 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HOXC6P09630 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
HOXC6P09630 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC22.24■■□□□ 1.15
HOXC6P09630 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
HOXC6P09630 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
HOXC6P09630 TSPY5P-201ENST00000426936 936 ntBASIC22.24■■□□□ 1.15
HOXC6P09630 AC007663.1-201ENST00000438948 1240 ntBASIC22.24■■□□□ 1.15
HOXC6P09630 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
HOXC6P09630 YBX1P2-201ENST00000489612 999 ntBASIC22.24■■□□□ 1.15
HOXC6P09630 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC22.24■■□□□ 1.15
HOXC6P09630 AL023803.3-201ENST00000615559 522 ntBASIC22.24■■□□□ 1.15
HOXC6P09630 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HOXC6P09630 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC22.24■■□□□ 1.15
HOXC6P09630 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HOXC6P09630 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HOXC6P09630 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC22.24■■□□□ 1.15
HOXC6P09630 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC22.23■■□□□ 1.15
HOXC6P09630 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC22.23■■□□□ 1.15
HOXC6P09630 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
HOXC6P09630 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
HOXC6P09630 MED25-212ENST00000618715 1467 ntTSL 5 BASIC22.23■■□□□ 1.15
HOXC6P09630 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
HOXC6P09630 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
HOXC6P09630 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
HOXC6P09630 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
HOXC6P09630 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HOXC6P09630 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC22.23■■□□□ 1.15
HOXC6P09630 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
HOXC6P09630 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC22.23■■□□□ 1.15
HOXC6P09630 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC22.23■■□□□ 1.15
HOXC6P09630 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HOXC6P09630 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
HOXC6P09630 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
HOXC6P09630 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HOXC6P09630 AL137060.1-201ENST00000618151 2648 ntBASIC22.22■■□□□ 1.15
HOXC6P09630 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HOXC6P09630 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HOXC6P09630 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC22.22■■□□□ 1.15
HOXC6P09630 COX11P1-201ENST00000489116 835 ntBASIC22.22■■□□□ 1.15
HOXC6P09630 Z85996.1-201ENST00000494644 937 ntBASIC22.22■■□□□ 1.15
HOXC6P09630 NMU-205ENST00000511469 756 ntTSL 3 BASIC22.22■■□□□ 1.15
HOXC6P09630 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC22.22■■□□□ 1.15
HOXC6P09630 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC22.22■■□□□ 1.15
HOXC6P09630 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC22.22■■□□□ 1.15
HOXC6P09630 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC22.22■■□□□ 1.15
HOXC6P09630 AC006128.1-201ENST00000624704 1661 ntBASIC22.22■■□□□ 1.15
HOXC6P09630 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC22.22■■□□□ 1.15
HOXC6P09630 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
HOXC6P09630 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
HOXC6P09630 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
HOXC6P09630 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
HOXC6P09630 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
HOXC6P09630 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
HOXC6P09630 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
HOXC6P09630 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC22.21■■□□□ 1.15
HOXC6P09630 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC22.21■■□□□ 1.15
HOXC6P09630 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
HOXC6P09630 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
HOXC6P09630 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC22.21■■□□□ 1.15
HOXC6P09630 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.15
HOXC6P09630 AC007225.1-201ENST00000566331 1836 ntBASIC22.2■■□□□ 1.14
HOXC6P09630 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HOXC6P09630 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HOXC6P09630 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HOXC6P09630 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HOXC6P09630 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC22.2■■□□□ 1.14
HOXC6P09630 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC22.2■■□□□ 1.14
HOXC6P09630 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HOXC6P09630 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HOXC6P09630 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC22.2■■□□□ 1.14
HOXC6P09630 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC22.2■■□□□ 1.14
HOXC6P09630 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC22.2■■□□□ 1.14
HOXC6P09630 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC22.2■■□□□ 1.14
HOXC6P09630 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC22.2■■□□□ 1.14
HOXC6P09630 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC22.2■■□□□ 1.14
HOXC6P09630 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC22.2■■□□□ 1.14
HOXC6P09630 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HOXC6P09630 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
HOXC6P09630 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HOXC6P09630 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HOXC6P09630 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC22.2■■□□□ 1.14
HOXC6P09630 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
HOXC6P09630 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
HOXC6P09630 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HOXC6P09630 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC22.19■■□□□ 1.14
HOXC6P09630 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC22.19■■□□□ 1.14
HOXC6P09630 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
HOXC6P09630 TSPY17P-201ENST00000450329 467 ntBASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms