Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ERCC1P07992 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.37■□□□□ 0.37
ERCC1P07992 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
ERCC1P07992 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ERCC1P07992 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.37■□□□□ 0.37
ERCC1P07992 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC1P07992 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
ERCC1P07992 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC1P07992 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC1P07992 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
ERCC1P07992 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC1P07992 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC1P07992 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
ERCC1P07992 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC1P07992 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ERCC1P07992 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC1P07992 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC1P07992 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.36■□□□□ 0.37
ERCC1P07992 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.36■□□□□ 0.37
ERCC1P07992 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC1P07992 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC1P07992 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ERCC1P07992 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.36■□□□□ 0.37
ERCC1P07992 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC1P07992 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC1P07992 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.36■□□□□ 0.37
ERCC1P07992 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC1P07992 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC1P07992 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC1P07992 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.36■□□□□ 0.37
ERCC1P07992 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.36■□□□□ 0.37
ERCC1P07992 AP003097.1-201ENST00000530657 1135 ntBASIC17.36■□□□□ 0.37
ERCC1P07992 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC1P07992 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC1P07992 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ERCC1P07992 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC1P07992 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC1P07992 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.36■□□□□ 0.37
ERCC1P07992 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.36■□□□□ 0.37
ERCC1P07992 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.36■□□□□ 0.37
ERCC1P07992 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.36■□□□□ 0.37
ERCC1P07992 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ERCC1P07992 AC092368.3-202ENST00000574180 1591 ntBASIC17.36■□□□□ 0.37
ERCC1P07992 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC1P07992 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ERCC1P07992 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC1P07992 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
ERCC1P07992 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ERCC1P07992 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC1P07992 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC1P07992 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
ERCC1P07992 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC1P07992 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.35■□□□□ 0.37
ERCC1P07992 AC026366.1-201ENST00000488803 879 ntBASIC17.35■□□□□ 0.37
ERCC1P07992 UNC93B5-201ENST00000530315 699 ntBASIC17.35■□□□□ 0.37
ERCC1P07992 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.35■□□□□ 0.37
ERCC1P07992 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.35■□□□□ 0.37
ERCC1P07992 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ERCC1P07992 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
ERCC1P07992 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ERCC1P07992 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ERCC1P07992 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.35■□□□□ 0.37
ERCC1P07992 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.35■□□□□ 0.37
ERCC1P07992 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC1P07992 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
ERCC1P07992 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC1P07992 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC1P07992 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC1P07992 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ERCC1P07992 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC1P07992 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC1P07992 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ERCC1P07992 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ERCC1P07992 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC1P07992 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.34■□□□□ 0.37
ERCC1P07992 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC1P07992 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC1P07992 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC1P07992 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.34■□□□□ 0.37
ERCC1P07992 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
ERCC1P07992 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC1P07992 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC1P07992 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.34■□□□□ 0.37
ERCC1P07992 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC1P07992 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
ERCC1P07992 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.34■□□□□ 0.37
ERCC1P07992 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
ERCC1P07992 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.34■□□□□ 0.37
ERCC1P07992 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.34■□□□□ 0.37
ERCC1P07992 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.34■□□□□ 0.37
ERCC1P07992 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.34■□□□□ 0.37
ERCC1P07992 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.34■□□□□ 0.37
ERCC1P07992 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ERCC1P07992 BX323043.1-201ENST00000641006 1765 ntBASIC17.34■□□□□ 0.37
ERCC1P07992 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC1P07992 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC1P07992 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC1P07992 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC1P07992 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC1P07992 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms