Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
COL2A1P02458 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
COL2A1P02458 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL2A1P02458 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC23.04■■□□□ 1.28
COL2A1P02458 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL2A1P02458 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC23.03■■□□□ 1.28
COL2A1P02458 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC23.03■■□□□ 1.28
COL2A1P02458 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL2A1P02458 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL2A1P02458 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL2A1P02458 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
COL2A1P02458 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL2A1P02458 AL162377.1-201ENST00000618844 1793 ntBASIC23.03■■□□□ 1.28
COL2A1P02458 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC23.03■■□□□ 1.28
COL2A1P02458 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC23.03■■□□□ 1.28
COL2A1P02458 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC23.03■■□□□ 1.28
COL2A1P02458 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC23.03■■□□□ 1.28
COL2A1P02458 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL2A1P02458 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC23.02■■□□□ 1.28
COL2A1P02458 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC23.02■■□□□ 1.28
COL2A1P02458 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC23.02■■□□□ 1.28
COL2A1P02458 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL2A1P02458 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL2A1P02458 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC23.02■■□□□ 1.28
COL2A1P02458 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL2A1P02458 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC23.02■■□□□ 1.28
COL2A1P02458 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC23.02■■□□□ 1.28
COL2A1P02458 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
COL2A1P02458 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC23.02■■□□□ 1.28
COL2A1P02458 AC010653.2-201ENST00000623505 997 ntBASIC23.02■■□□□ 1.28
COL2A1P02458 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
COL2A1P02458 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
COL2A1P02458 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL2A1P02458 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL2A1P02458 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC23.01■■□□□ 1.27
COL2A1P02458 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL2A1P02458 HIST1H2APS4-201ENST00000362070 348 ntBASIC23.01■■□□□ 1.27
COL2A1P02458 CCR12P-201ENST00000446203 998 ntBASIC23.01■■□□□ 1.27
COL2A1P02458 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC23.01■■□□□ 1.27
COL2A1P02458 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL2A1P02458 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
COL2A1P02458 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
COL2A1P02458 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL2A1P02458 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL2A1P02458 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
COL2A1P02458 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC23.01■■□□□ 1.27
COL2A1P02458 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC23.01■■□□□ 1.27
COL2A1P02458 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
COL2A1P02458 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
COL2A1P02458 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL2A1P02458 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC23■■□□□ 1.27
COL2A1P02458 KRT8P41-201ENST00000533985 1514 ntBASIC23■■□□□ 1.27
COL2A1P02458 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL2A1P02458 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC23■■□□□ 1.27
COL2A1P02458 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL2A1P02458 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC23■■□□□ 1.27
COL2A1P02458 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL2A1P02458 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC23■■□□□ 1.27
COL2A1P02458 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC23■■□□□ 1.27
COL2A1P02458 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
COL2A1P02458 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC23■■□□□ 1.27
COL2A1P02458 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC23■■□□□ 1.27
COL2A1P02458 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL2A1P02458 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23■■□□□ 1.27
COL2A1P02458 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC23■■□□□ 1.27
COL2A1P02458 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
COL2A1P02458 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC22.99■■□□□ 1.27
COL2A1P02458 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
COL2A1P02458 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
COL2A1P02458 AC104076.2-201ENST00000448912 469 ntBASIC22.99■■□□□ 1.27
COL2A1P02458 CA15P1-201ENST00000481698 905 ntBASIC22.99■■□□□ 1.27
COL2A1P02458 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
COL2A1P02458 AL023803.3-201ENST00000615559 522 ntBASIC22.99■■□□□ 1.27
COL2A1P02458 AC116562.4-202ENST00000641738 218 ntBASIC22.99■■□□□ 1.27
COL2A1P02458 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
COL2A1P02458 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL2A1P02458 GABARAPL3-202ENST00000624044 1851 ntBASIC22.99■■□□□ 1.27
COL2A1P02458 AC092338.2-201ENST00000568827 1415 ntBASIC22.99■■□□□ 1.27
COL2A1P02458 TPM1-226ENST00000560959 925 ntTSL 2 BASIC22.98■■□□□ 1.27
COL2A1P02458 NT5C-211ENST00000582170 653 ntTSL 3 BASIC22.98■■□□□ 1.27
COL2A1P02458 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC22.98■■□□□ 1.27
COL2A1P02458 AL512408.1-201ENST00000569378 2000 ntBASIC22.98■■□□□ 1.27
COL2A1P02458 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
COL2A1P02458 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
COL2A1P02458 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
COL2A1P02458 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL2A1P02458 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL2A1P02458 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
COL2A1P02458 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL2A1P02458 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
COL2A1P02458 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL2A1P02458 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL2A1P02458 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL2A1P02458 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
COL2A1P02458 LIN28AP1-201ENST00000429574 405 ntBASIC22.98■■□□□ 1.27
COL2A1P02458 AC007663.1-201ENST00000438948 1240 ntBASIC22.98■■□□□ 1.27
COL2A1P02458 RNF146-204ENST00000476956 884 ntTSL 2 BASIC22.98■■□□□ 1.27
COL2A1P02458 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC22.98■■□□□ 1.27
COL2A1P02458 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC22.98■■□□□ 1.27
COL2A1P02458 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms