Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.07■□□□□ 0.96
CSPG5O95196 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.07■□□□□ 0.96
CSPG5O95196 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.07■□□□□ 0.96
CSPG5O95196 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.07■□□□□ 0.96
CSPG5O95196 C1QL1P1-201ENST00000568105 661 ntBASIC21.07■□□□□ 0.96
CSPG5O95196 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.07■□□□□ 0.96
CSPG5O95196 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CSPG5O95196 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CSPG5O95196 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CSPG5O95196 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CSPG5O95196 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CSPG5O95196 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CSPG5O95196 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
CSPG5O95196 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CSPG5O95196 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CSPG5O95196 DPP3P2-201ENST00000416030 1696 ntBASIC21.06■□□□□ 0.96
CSPG5O95196 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CSPG5O95196 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CSPG5O95196 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CSPG5O95196 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CSPG5O95196 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.06■□□□□ 0.96
CSPG5O95196 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.06■□□□□ 0.96
CSPG5O95196 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CSPG5O95196 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.06■□□□□ 0.96
CSPG5O95196 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CSPG5O95196 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
CSPG5O95196 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CSPG5O95196 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CSPG5O95196 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.06■□□□□ 0.96
CSPG5O95196 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.06■□□□□ 0.96
CSPG5O95196 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CSPG5O95196 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CSPG5O95196 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.05■□□□□ 0.96
CSPG5O95196 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CSPG5O95196 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CSPG5O95196 KRT8P17-201ENST00000453110 1448 ntBASIC21.05■□□□□ 0.96
CSPG5O95196 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.05■□□□□ 0.96
CSPG5O95196 PLK5-205ENST00000642079 1969 ntBASIC21.05■□□□□ 0.96
CSPG5O95196 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CSPG5O95196 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CSPG5O95196 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.05■□□□□ 0.96
CSPG5O95196 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.05■□□□□ 0.96
CSPG5O95196 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.05■□□□□ 0.96
CSPG5O95196 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CSPG5O95196 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CSPG5O95196 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
CSPG5O95196 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
CSPG5O95196 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.05■□□□□ 0.96
CSPG5O95196 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CSPG5O95196 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CSPG5O95196 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSPG5O95196 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSPG5O95196 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.04■□□□□ 0.96
CSPG5O95196 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSPG5O95196 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSPG5O95196 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSPG5O95196 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSPG5O95196 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSPG5O95196 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSPG5O95196 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.04■□□□□ 0.96
CSPG5O95196 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSPG5O95196 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.04■□□□□ 0.96
CSPG5O95196 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.04■□□□□ 0.96
CSPG5O95196 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.04■□□□□ 0.96
CSPG5O95196 AC022616.7-201ENST00000525383 220 ntBASIC21.04■□□□□ 0.96
CSPG5O95196 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.04■□□□□ 0.96
CSPG5O95196 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.04■□□□□ 0.96
CSPG5O95196 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CSPG5O95196 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSPG5O95196 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSPG5O95196 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.04■□□□□ 0.96
CSPG5O95196 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSPG5O95196 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CSPG5O95196 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSPG5O95196 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSPG5O95196 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSPG5O95196 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSPG5O95196 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CSPG5O95196 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.04■□□□□ 0.96
CSPG5O95196 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.03■□□□□ 0.96
CSPG5O95196 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.03■□□□□ 0.96
CSPG5O95196 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CSPG5O95196 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.03■□□□□ 0.96
CSPG5O95196 FAM87A-204ENST00000613235 858 ntBASIC21.03■□□□□ 0.96
CSPG5O95196 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.03■□□□□ 0.96
CSPG5O95196 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.03■□□□□ 0.96
CSPG5O95196 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.03■□□□□ 0.96
CSPG5O95196 AC005229.4-201ENST00000610085 2198 ntBASIC21.03■□□□□ 0.96
CSPG5O95196 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.03■□□□□ 0.96
CSPG5O95196 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
CSPG5O95196 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CSPG5O95196 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSPG5O95196 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
CSPG5O95196 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CSPG5O95196 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSPG5O95196 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CSPG5O95196 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.02■□□□□ 0.96
CSPG5O95196 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
CSPG5O95196 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.02■□□□□ 0.96
CSPG5O95196 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms