Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.64■□□□□ 0.73
GPC4O75487 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
GPC4O75487 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GPC4O75487 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GPC4O75487 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
GPC4O75487 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
GPC4O75487 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GPC4O75487 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
GPC4O75487 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
GPC4O75487 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GPC4O75487 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
GPC4O75487 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GPC4O75487 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GPC4O75487 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GPC4O75487 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.63■□□□□ 0.73
GPC4O75487 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GPC4O75487 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GPC4O75487 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
GPC4O75487 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
GPC4O75487 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GPC4O75487 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GPC4O75487 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
GPC4O75487 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.63■□□□□ 0.73
GPC4O75487 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GPC4O75487 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
GPC4O75487 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GPC4O75487 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GPC4O75487 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
GPC4O75487 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.62■□□□□ 0.73
GPC4O75487 AC116562.4-201ENST00000641316 2276 ntBASIC19.62■□□□□ 0.73
GPC4O75487 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
GPC4O75487 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GPC4O75487 HLA-G-202ENST00000376815 851 ntBASIC19.62■□□□□ 0.73
GPC4O75487 HLA-G-203ENST00000376818 1127 ntBASIC19.62■□□□□ 0.73
GPC4O75487 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
GPC4O75487 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.62■□□□□ 0.73
GPC4O75487 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.62■□□□□ 0.73
GPC4O75487 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.62■□□□□ 0.73
GPC4O75487 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.62■□□□□ 0.73
GPC4O75487 AC005829.2-201ENST00000571422 1056 ntBASIC19.62■□□□□ 0.73
GPC4O75487 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.62■□□□□ 0.73
GPC4O75487 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
GPC4O75487 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.62■□□□□ 0.73
GPC4O75487 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GPC4O75487 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GPC4O75487 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
GPC4O75487 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GPC4O75487 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
GPC4O75487 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GPC4O75487 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
GPC4O75487 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
GPC4O75487 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
GPC4O75487 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GPC4O75487 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GPC4O75487 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GPC4O75487 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
GPC4O75487 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
GPC4O75487 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GPC4O75487 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.61■□□□□ 0.73
GPC4O75487 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.61■□□□□ 0.73
GPC4O75487 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.61■□□□□ 0.73
GPC4O75487 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GPC4O75487 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GPC4O75487 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.61■□□□□ 0.73
GPC4O75487 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
GPC4O75487 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GPC4O75487 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.61■□□□□ 0.73
GPC4O75487 AC060766.5-201ENST00000590539 871 ntBASIC19.61■□□□□ 0.73
GPC4O75487 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.61■□□□□ 0.73
GPC4O75487 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
GPC4O75487 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.61■□□□□ 0.73
GPC4O75487 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
GPC4O75487 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GPC4O75487 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.61■□□□□ 0.73
GPC4O75487 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
GPC4O75487 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GPC4O75487 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GPC4O75487 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GPC4O75487 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.6■□□□□ 0.73
GPC4O75487 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
GPC4O75487 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.6■□□□□ 0.73
GPC4O75487 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GPC4O75487 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GPC4O75487 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.6■□□□□ 0.73
GPC4O75487 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
GPC4O75487 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GPC4O75487 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
GPC4O75487 AC020763.4-201ENST00000623414 4170 ntBASIC19.6■□□□□ 0.73
GPC4O75487 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GPC4O75487 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.6■□□□□ 0.73
GPC4O75487 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GPC4O75487 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GPC4O75487 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
GPC4O75487 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GPC4O75487 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
GPC4O75487 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GPC4O75487 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GPC4O75487 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.6■□□□□ 0.73
GPC4O75487 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
GPC4O75487 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms