Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC28A2O43868 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SLC28A2O43868 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SLC28A2O43868 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC28A2O43868 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC28A2O43868 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC28A2O43868 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.89■□□□□ 0.61
SLC28A2O43868 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SLC28A2O43868 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC28A2O43868 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC28A2O43868 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC28A2O43868 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC28A2O43868 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.89■□□□□ 0.61
SLC28A2O43868 AC100791.3-201ENST00000617619 330 ntBASIC18.89■□□□□ 0.61
SLC28A2O43868 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC28A2O43868 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SLC28A2O43868 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC28A2O43868 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
SLC28A2O43868 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC28A2O43868 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC28A2O43868 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC28A2O43868 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.89■□□□□ 0.61
SLC28A2O43868 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC28A2O43868 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SLC28A2O43868 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC28A2O43868 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC28A2O43868 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC28A2O43868 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SLC28A2O43868 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC28A2O43868 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC28A2O43868 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC28A2O43868 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC28A2O43868 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.88■□□□□ 0.61
SLC28A2O43868 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.88■□□□□ 0.61
SLC28A2O43868 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
SLC28A2O43868 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.88■□□□□ 0.61
SLC28A2O43868 AL353708.3-201ENST00000610272 989 ntBASIC18.88■□□□□ 0.61
SLC28A2O43868 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC28A2O43868 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC28A2O43868 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC28A2O43868 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.88■□□□□ 0.61
SLC28A2O43868 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC28A2O43868 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC28A2O43868 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SLC28A2O43868 DPP3P2-201ENST00000416030 1696 ntBASIC18.88■□□□□ 0.61
SLC28A2O43868 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC28A2O43868 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC28A2O43868 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC28A2O43868 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC28A2O43868 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC28A2O43868 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC28A2O43868 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC28A2O43868 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC28A2O43868 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC28A2O43868 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SLC28A2O43868 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.87■□□□□ 0.61
SLC28A2O43868 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC28A2O43868 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.87■□□□□ 0.61
SLC28A2O43868 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.87■□□□□ 0.61
SLC28A2O43868 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC28A2O43868 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.87■□□□□ 0.61
SLC28A2O43868 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.87■□□□□ 0.61
SLC28A2O43868 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.87■□□□□ 0.61
SLC28A2O43868 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.87■□□□□ 0.61
SLC28A2O43868 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.87■□□□□ 0.61
SLC28A2O43868 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC28A2O43868 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.87■□□□□ 0.61
SLC28A2O43868 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC28A2O43868 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC28A2O43868 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
SLC28A2O43868 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC28A2O43868 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
SLC28A2O43868 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC28A2O43868 TCF3P1-201ENST00000423021 1937 ntBASIC18.86■□□□□ 0.61
SLC28A2O43868 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC28A2O43868 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC28A2O43868 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC28A2O43868 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC28A2O43868 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SLC28A2O43868 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
SLC28A2O43868 MMP23A-201ENST00000234610 1017 ntBASIC18.86■□□□□ 0.61
SLC28A2O43868 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC28A2O43868 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
SLC28A2O43868 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC28A2O43868 AC133681.1-201ENST00000465482 601 ntBASIC18.86■□□□□ 0.61
SLC28A2O43868 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.86■□□□□ 0.61
SLC28A2O43868 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SLC28A2O43868 AC005363.2-201ENST00000618631 242 ntBASIC18.86■□□□□ 0.61
SLC28A2O43868 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC28A2O43868 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.85■□□□□ 0.61
SLC28A2O43868 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC28A2O43868 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
SLC28A2O43868 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
SLC28A2O43868 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC28A2O43868 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC28A2O43868 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC28A2O43868 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SLC28A2O43868 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC28A2O43868 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC28A2O43868 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms